Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04286 | ATGGATCTCGAAAAGAAAGACGAACAACCTCTCAGATCCGTTCCCTTCTCCGTCGCCGACGACCCATCCCGGAAACTCAAACGCCGGCGATGCATCATCTGTTGTTCATCGGTCGTCGGAGTTATACTCACCATCGGTTTAGTTATACTAATTTTAAGCCTCACTGTCTTCAAAGCAAAGAAGCCTGTTTTGACTGTCAATTCCGTACAGCTTCAAGACCTTGCTTTCTCCGTCAATCCAATTCCAGTTAGGGTTTCATTGAATCTCTCACTGGCTTTAGATATCTCCATTGATAACCCGAATAAGGTCAGTATCACTTACCAGAACAGCTCGGCGGTGCTCCGGTATAGAGGGAAAGACATCGGAAACGTCCCTGTACCGGCCGGAAAAATTGGTTCCGATGATACGTCGCGAGTGCATCTGACGCTTACAGTTTTTGCTGATCGGCTGGTTTCAGATTCAGAGATCTATGGAGATATTTTGAGTGGTAATTTGCCGTTTTCGACTTATACCAGAATCAAAGCTAGAGTTCGTGTTCTGTTTTTTCATATTCATGTTACGTCGACATCGACATGCGATGTGAATATAGATATTCAAAGCAGGAAGATCGCGAATCAAACTTGCCATTACAAGAATAAAATTTAG | 645 | 43.88 | MDLEKKDEQPLRSVPFSVADDPSRKLKRRRCIICCSSVVGVILTIGLVILILSLTVFKAKKPVLTVNSVQLQDLAFSVNPIPVRVSLNLSLALDISIDNPNKVSITYQNSSAVLRYRGKDIGNVPVPAGKIGSDDTSRVHLTLTVFADRLVSDSEIYGDILSGNLPFSTYTRIKARVRVLFFHIHVTSTSTCDVNIDIQSRKIANQTCHYKNKI | 214 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04286 | 214 | Gene3D | - | 48 | 199 | - | - | |
| Stre1g04286 | 214 | Pfam | Late embryogenesis abundant protein | 95 | 190 | IPR004864 | - | |
| Stre1g04286 | 214 | PANTHER | LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY | 23 | 205 | - | - | |
| Stre1g04286 | 214 | SUPERFAMILY | LEA14-like | 54 | 152 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04286 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 5190733 | Stre | Stre1g04273 | Stre-Chr1:128681367 | Stre1g04286 | Stre-Chr1:128909246 | |
| 5190743 | Stre | Stre1g04286 | Stre-Chr1:128909246 | Stre8g00211 | Stre-Chr8:4346216 | |
| 5228195 | Stre | Stre1g04286 | Stre-Chr1:128909246 | Stre6g01077 | Stre-Chr6:50349784 |