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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04294 ATGATTATTATTATGGAAGCCATTAAACACATCACCTCCATCTTCTTCATGTTTCTTTTCATCTACACATCAACTTCAGGTTTCATAGAACAGAACCCGGTTAGAGCTGACTTGCCAATACTGATACCAGTGCCAGTAACATCGGGACGGAGTGAATATCGCGTGGCAGCCGAACTGGACCGCGGTGGACAACGACGGAAACTCGGTCCATTTCAGGTATGCTTAGTATGCCGGTGTTGCGTGATGGCAACCGATCCATCCACATGTTCGAACATGCCGTGTTGCTTCGGCATCGACTGTCAGCTTCCAAACAAGCCGTTTGGTGTGTGTGCATTCGTCCCCAAGACTTGCAATTGTACCACTTGTGCTACTGCATAA 378 47.62 MIIIMEAIKHITSIFFMFLFIYTSTSGFIEQNPVRADLPILIPVPVTSGRSEYRVAAELDRGGQRRKLGPFQVCLVCRCCVMATDPSTCSNMPCCFGIDCQLPNKPFGVCAFVPKTCNCTTCATA 125
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04294 125 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 14 123 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04294 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5190751 Stre Stre1g04294 Stre-Chr1:129046748 Stre7g01023 Stre-Chr7:34985018
5219261 Stre Stre1g04294 Stre-Chr1:129046748 Stre6g01076 Stre-Chr6:50237663