Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04299 | ATGGCGCTCAAAGATCATAAGTTCCTAACCTGCTACTTCGTTTTCATCGTCTTGACTATCCACACGACGACTAAACTCGTTTCCGCCGATGCGATCCAAGGTTGCGGTGGTTTTGTCGAGGCGAGCTCATCTTTGATCAAATCAAGGAAGCCAACTGATGCAAAATTGGATTATTCGCATATCACGGTAGAGCTGCGTACTTTGGATGGATTGGTAAAGGATCGAACACAATGTGCTCCTAATGGTTACTACTTCATCCCTGTGTATGACAAGGGTTCTTTTGTCATTAAAATTAAAGGACCAGAAGGATGGTCATGGGACCCAAATCAGGTTCCCGTGCTTGTCGATCATACCGGCTGTAATGGAAATGAAGATATAAATTTTCGGTTTACAGGGTTTAGTATTAGTGGAAAAGTTGTGGGAGCAGTTGGCGGTGCAAGTTGTAAATCTACTGATGGTGGTCCATCAAATGTAAAAGTTGAGCTTTTGAATTCTGATGGAAATGTTGTATCTTCTGTTTTCACATCAGCATCTGGAAGTTACTCTTTCACCAATATTAATCCAGGACGATATAACCTACGGGTATCTCATGATGACTTGAATATTGAAGTTAAAGGTTCAACAGAGGTTGAATTGGGATTTGGAAATAGCCAAGTTGATGATGTCTTTTTTGTCTCCGGTTATGATATTCGTGGATCGGTAGTTGCACAGGGAAACCCTATTTTGGGGGTTCACTTTTATCTGTACTCTGATGATGTTAAAGAAGTGTACTGCCCACAGGGTTCTGGTAACCCATCTGGAGATAAAACGGCTCTTTGTCATGCAATATCTGATGTTGATGAAAATTTAAATTTAAGTGTTTATAAACTTATACCTTACTATAAGGGTGAGAATACAGTTTTTGATGTTTCACCTCCCTCTGCAACTGTAACTGTAAAACATGATCATGCAACCGTATCTGAAAAGTTTCAGGTTACTGGATTTTCTGTTGGGGGACGTGTTGTTGATTCTGTTGGCAACGGAGTTGGTGGTGTAAAAATTGTGGTTGATGGTGTTGAGAGGTCCATCACTGATAAAGAAGGATATTATAAGCTCGATCAGGTTACATCTAAACAATATCTGATTGAAGCCAAAAAAGAGCACTACAAGTTTGACAAATTGGTTAACTTCATGGTTTTACCAAATATGGCATCAGTTGCTGATATCAAAGCAGTTTCATATAATGTTTGTGGGTCAGTGCAGACAGTTGATTCTGGTTACAAAGCAAAAGTGGCTCTGACTCATGGACCAGATAACGTTAAACCACAAAAGAAACAAACTGATGATAACGGCTATTTCTGCTTTGAGGTTCCACCTGGCGACTATCGGTTATCAGCTATTGCAGCCACACCTGAAACTACTCCGCATCTTTTATTTTCACCGCCACATATTGATGTCAATGTTAATGGTCCGTTGCTGTCACTGAAATTTTCTCAGGCACAAGTTAATGTTGGTGGCACAGTAACTTGCAAAGAAAAATGTGATTCATCTGTTTCTGTTGATCTTGTGAGATTGGATGCTAAAAGCAATGTAGAAAAGCAGACAGTTGGTTTGAATGACCAAAGTAATGAATTTTTATTTCAAAATGTCCTACCTGGAAAATATAAGCTTGAGGTCAAACACCTCTCTGAAGGAGTTAAATCTGGAGAAGATAAATGGTGTTGGGAAAAAAGCTCTGTACCTCTTAATGTTGGAACAGAAGATGTTAAAGGGATTAAATTTGTTCAGAAAGGTTATTGGGTTAACTTGGTTTCAACTCATGATGTAGATGCATATTTGCATCAATCAGATGGTACTCGTGTGGATCTGAAAATTAAGCACATTTGCATTGAATCTCCTGGAGTGCATGAACTTCACTTTGTCAACTCTTGTATACATTTTGGAGGCTCCTCTGTGAAAATTGACACCGCCAACACCTCGCCCATCTATCTGAAAGGAGAGAAGTATTTACTCGAAGGAGAAATTAAGGTTGAATTGACCTCACAATATGGTGTTGACCGGTTACCTAAAGGTCTAGTGGTTGACATTTTGAATGAAGAAGGAAAAGTTATTGATGGAACTACTGCAAAATTTGTTGGAAACGAAAATGAACAATCGCATACAGCTCTTTTCAAGTATAAAATATGGGCAAATCCTGGAGAAAAACTTACATTTGCACCTAAGGATATTAGCAATAATGAAAAGAAGATTTTATTTTATCCTAGACAACATCAGGTCAAAGTGTCACAAAATGGCTGTCAAGCATCAGTTCCTCCATTTTCCGCACGAATTGGGTTGTACATTGAAGGATCGGTTTCTCCCCCACTTCCAGATGTTTTTATTAAAATCTTTGCTTCTGGAGATAGTCAAAATGCTCAAATAAAGAAAAATGATTTGATTTATGAAACAACTTCAAGCATTGATGGCTCGTTTATTGGTGGACCCCTATATGATGACATCACTTACTATACCCAAGCTTCAAAGTCTAGTTATCATGTAAAGGAAATTGGACCGAATTCCTTTTCGTGTCAAAAACTTGGTCAAATTTCTGTGCGTATACATTCCAAAGAAGATGCCAATGAATTATTTCCGTCGGTTTTGTTATCATTAAGTGGCGAAGATGGTTATAGAAATAATTCAATATCTGCTGCTGGTGGAACTTTTGTATTTGATAATTTATTTCCTGGAAGCTTTTATCTCCGTCCTCTGTTGAAGGAGTATGCTTTCTCACCATCAGCACAAGCAGTTGAACTCGGGTCTGGGGAATCCACGGAAGTTGTTTTCCAAGCTACACGTGTCGCTTACAGTGCTATGGGTGCGGTTACTCTGTTATCTGGTCTACCAAAAGAAGGCGTTTCAGTTGAGGCCCGCTCTAATAAAGGTTATTATGAGGAAACTGTCACAGATTCACTAGGAAATTATCGCCTTCGAGGACTTCACCCCGATACAACTTACACAATTAAAATAGCAAAAATCAATGGAATTGGTGCCTCTAACATCGAACGGGCTTCACCAGAATCTGTTGAAGTCAAGGTTGGATATGAAGACATCAAGGGATTAGACTTTTTGGTTTTTGAGCAACCACAAACAACTTTATTAACCGGCGTTGTTCGAGGAAGCAGAATCAATGAGTTGTATGAACATCTACAATTGGAAGTTAGATCGGCTAGTGATCCATCTAATATTGAATCATTGTCGCCTTTGTCACTTTCATACTTCTTCCAGATAAAGGGTTTGCCAAGGGGTAAACATCTTCTGCTTCTTCGGTCTACCTTGACACCACGCACTCTCAGATTTGAATCCGAAGTCGTTGAGGTTGATTTGGAGACAAATACGCAAGCTCATGTGCGTTCTTTGACGTACAAAATTGAAGATGAACACCATAAACAGGAATTGACTCCAGCACCTGTGTATCCACTCATTATTGGAGTATCAGTGATTGCATTATTTATTAGCATGCCAAGATTAAAAGACATGTACCAAAGCAATGTTGGAGTACTGGTACCGGGACCCACTGCATCGACTAAAAAAGTCGTGAGAAGGAAGACTTACTAA | 3573 | 39.24 | MALKDHKFLTCYFVFIVLTIHTTTKLVSADAIQGCGGFVEASSSLIKSRKPTDAKLDYSHITVELRTLDGLVKDRTQCAPNGYYFIPVYDKGSFVIKIKGPEGWSWDPNQVPVLVDHTGCNGNEDINFRFTGFSISGKVVGAVGGASCKSTDGGPSNVKVELLNSDGNVVSSVFTSASGSYSFTNINPGRYNLRVSHDDLNIEVKGSTEVELGFGNSQVDDVFFVSGYDIRGSVVAQGNPILGVHFYLYSDDVKEVYCPQGSGNPSGDKTALCHAISDVDENLNLSVYKLIPYYKGENTVFDVSPPSATVTVKHDHATVSEKFQVTGFSVGGRVVDSVGNGVGGVKIVVDGVERSITDKEGYYKLDQVTSKQYLIEAKKEHYKFDKLVNFMVLPNMASVADIKAVSYNVCGSVQTVDSGYKAKVALTHGPDNVKPQKKQTDDNGYFCFEVPPGDYRLSAIAATPETTPHLLFSPPHIDVNVNGPLLSLKFSQAQVNVGGTVTCKEKCDSSVSVDLVRLDAKSNVEKQTVGLNDQSNEFLFQNVLPGKYKLEVKHLSEGVKSGEDKWCWEKSSVPLNVGTEDVKGIKFVQKGYWVNLVSTHDVDAYLHQSDGTRVDLKIKHICIESPGVHELHFVNSCIHFGGSSVKIDTANTSPIYLKGEKYLLEGEIKVELTSQYGVDRLPKGLVVDILNEEGKVIDGTTAKFVGNENEQSHTALFKYKIWANPGEKLTFAPKDISNNEKKILFYPRQHQVKVSQNGCQASVPPFSARIGLYIEGSVSPPLPDVFIKIFASGDSQNAQIKKNDLIYETTSSIDGSFIGGPLYDDITYYTQASKSSYHVKEIGPNSFSCQKLGQISVRIHSKEDANELFPSVLLSLSGEDGYRNNSISAAGGTFVFDNLFPGSFYLRPLLKEYAFSPSAQAVELGSGESTEVVFQATRVAYSAMGAVTLLSGLPKEGVSVEARSNKGYYEETVTDSLGNYRLRGLHPDTTYTIKIAKINGIGASNIERASPESVEVKVGYEDIKGLDFLVFEQPQTTLLTGVVRGSRINELYEHLQLEVRSASDPSNIESLSPLSLSYFFQIKGLPRGKHLLLLRSTLTPRTLRFESEVVEVDLETNTQAHVRSLTYKIEDEHHKQELTPAPVYPLIIGVSVIALFISMPRLKDMYQSNVGVLVPGPTASTKKVVRRKTY | 1190 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04299 | 1190 | Pfam | BOS complex subunit NOMO1-like, beta sandwich domain | 771 | 843 | IPR055073 | - | |
| Stre1g04299 | 1190 | PANTHER | CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING | 29 | 1168 | IPR051417 | GO:0005789(PANTHER) | |
| Stre1g04299 | 1190 | Pfam | Carboxypeptidase regulatory-like domain | 155 | 206 | - | - | |
| Stre1g04299 | 1190 | SUPERFAMILY | Cna protein B-type domain | 945 | 1003 | - | - | |
| Stre1g04299 | 1190 | Gene3D | - | 330 | 420 | - | - | |
| Stre1g04299 | 1190 | SUPERFAMILY | Cna protein B-type domain | 150 | 200 | - | - | |
| Stre1g04299 | 1190 | Pfam | BOS complex subunit NOMO1-like, first beta sandwich domain | 52 | 128 | IPR055075 | - | |
| Stre1g04299 | 1190 | Gene3D | Immunoglobulins | 146 | 256 | IPR013783 | - | |
| Stre1g04299 | 1190 | SUPERFAMILY | Cna protein B-type domain | 866 | 926 | - | - | |
| Stre1g04299 | 1190 | SUPERFAMILY | Carboxypeptidase regulatory domain-like | 329 | 423 | IPR008969 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04299 | K26500 | BOS complex subunit NOMO |