AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04301 ATGAAGTTTGATAATCACATTCTTGTTATAATCTCCATTGTTTCTCTCTTTTTCATTGTCTTCACGGAAGGAACAGATGTCTCACAATCCTCATCAAATGAAGACGAAATATATGATGATATCGAAACGACATTTCGGACCTCTTTAGATGATGACAAGGAGAAATCTGGGCCAATTTCATCGTTGGATTTTGACCTAGATGACGCTAAAGAGGCACTTGGGCCAATTCCGTCAATTGATGAAGCTAAAGAGGCGTTAGGGCCAGCTTCATCATCCATTATAGACAAAGCAAAAGACGCGTTGGGCCCAATTTCACCCGCGGCTTTAGATGAAGCAAAAGAGGCTCTTGGGCCTGCAGCAGCTAAAGCGAAAGAGGCTTTGGCCCCAATTTCACCATCGGCTCTAGAAGACGCAAAAGAGGCCCTCGGCCCAGCTTCAGCTAAAGCCAAAGAGGCTCTCGGGCCTGCTTCATCTAACATCATAGATAAGGCCAAAGATAAACTTGACTCGATTACATCTTGGATTACTCAAAACAAAGAGCAAGTATCTTCAGAAACCCACGAGGAATCCGACCCAAAAGAGGTACCAACCCCTGCCCAAGCTTTGGACCCATATGGAATCTTAGATGGCGCGAAACAAAAATTCGACTCACTTTTAGATTCAATTACCCAAGAGAAAACACAAATATCCCAAAAGGAATCAACTCCAATTTCTTCCATAGATGTTGATAAAGATATAGCCCAAAAAACAATGGGCCCAGTTATAAAAGTAAGCCCAGCTTCATCTTCACCTCCAGATTCATCGGAAGGTGAAGATCTATCTAAAATCTTAGATAAAGCTAAAGAAAATTCTGGGTCAAGCCCTGCCCCTGTCCCTGTTTCGCCTTCGACTTTCGAGGAAGCGAAACATGCGATAGGTTCGTATTCTACTAAAGCTATAGATGCAGCTAAAGAAAAATTTGGCTCAATTTCATCATACATATCCAAAAATAAGCTACAAATATCACCTGTGTCAGACGATAAGCCCCATTCGACTCCTGTATTCTTAGACCATGACGTTGCTTTAGCTATTGAGTCAATGATCAAACAAGCAGAAACAAATTCACAGTTAGCTATTGATGAGGCTAAAACTCTATTTAGTGATCCAATTGTTGATTCATCTGATACTGGAAAATGTGTGAAGAAATGTTTGGGTAATTATGAATCTTGCAATCTTAAACTAAACAAGGCTATGGAAGATCTAAGGGCCCGCAATGTGGAATTGCTAACAGATGATATTGGTGCGGTTGAAGGAGATATTAGCACGTGTCAAAAGTGCTTTCAAGAACATACGAACACACAATCTCCGTTTAATGATTTGGAGGAGGCTATAATCAAGGCTACTCGTGAATGCTTAAACGTTCTAGACCATTCTGGTTTGAGAAGTCGTTGTGAAGCCCAAAAAGAAAAAAAGAAGCAGGTGAAAAGTTTGAGGTGTGCGGAACACAAGTCGGCGTTATCATCAGAAATGGATCCGTTTAGCTTTGATATTTACGATTCGTCAAGTTCAGAAGATGATCACGACTCATCAAGTTCAGAAGATGATCACGACAAAGTTACACGACGTAACTTCGAGTTTTTAACAACCGTTGTAACCGCGTGTTTAGGAATGGATCTCCGATCGACGAGGTCCTATTCAAAAAGGTTTTGTGGTGAAGTTACAATGGACACACAGATTCAAGATGAAACAATTCGAGTCCAACGGTTAAAGCAACACTTTGTCTTGGATCTGAAACGCATACAATTGAAGCTTGCAAAGGGATTCTTTCAGACCAATTGGTTTATTTGA 1827 40.89 MKFDNHILVIISIVSLFFIVFTEGTDVSQSSSNEDEIYDDIETTFRTSLDDDKEKSGPISSLDFDLDDAKEALGPIPSIDEAKEALGPASSSIIDKAKDALGPISPAALDEAKEALGPAAAKAKEALAPISPSALEDAKEALGPASAKAKEALGPASSNIIDKAKDKLDSITSWITQNKEQVSSETHEESDPKEVPTPAQALDPYGILDGAKQKFDSLLDSITQEKTQISQKESTPISSIDVDKDIAQKTMGPVIKVSPASSSPPDSSEGEDLSKILDKAKENSGSSPAPVPVSPSTFEEAKHAIGSYSTKAIDAAKEKFGSISSYISKNKLQISPVSDDKPHSTPVFLDHDVALAIESMIKQAETNSQLAIDEAKTLFSDPIVDSSDTGKCVKKCLGNYESCNLKLNKAMEDLRARNVELLTDDIGAVEGDISTCQKCFQEHTNTQSPFNDLEEAIIKATRECLNVLDHSGLRSRCEAQKEKKKQVKSLRCAEHKSALSSEMDPFSFDIYDSSSSEDDHDSSSSEDDHDKVTRRNFEFLTTVVTACLGMDLRSTRSYSKRFCGEVTMDTQIQDETIRVQRLKQHFVLDLKRIQLKLAKGFFQTNWFI 608
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04301 608 Coils Coil 404 424 - -
Stre1g04301 608 MobiDBLite consensus disorder prediction 176 204 - -
Stre1g04301 608 SUPERFAMILY Apolipoprotein A-I 60 182 - -
Stre1g04301 608 SUPERFAMILY Plant invertase-pectin methylesterase inhibitor 360 466 IPR035513 -
Stre1g04301 608 Gene3D Invertase-pectin methylesterase inhibitor family protein 342 470 IPR035513 -
Stre1g04301 608 MobiDBLite consensus disorder prediction 253 272 - -
Stre1g04301 608 MobiDBLite consensus disorder prediction 255 269 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04301 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5228687 Stre Stre1g04301 Stre-Chr1:129170241 Stre8g00270 Stre-Chr8:5475728