AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04316 ATGCATATTATGAAAACCAGACAAAGATCGGTGGTGAGCCGTCGAGCTTGGAACCTACTCCGGTTAGCCTTGTTATGGGCTCGAAAAGGTGGAGTCTTTGTGGTCAAGAAACGGCTCATGCTGGACCTGACTCATTTTGTCAAGAACCTGGGTCAGTCCAAGAAAGGTAACGGTGCACTCCAGTTCGGTGACCGGCAGCTATCGTTTGATGCAACCCCGATAATCCATGTTCGGATGCACCGACCCAACTCGATGCGGTTCCGGTTGCCTCATATTCCTTGCATCAACCCACATGTTGATTGTTCGGATATGTTTGAGTTTGATGATGAGAGTGATCGGTACTCGTGTTGTGAAGCGGGAACGAGTTTCTTGATCGCGAATGGTGAAGATTGTGATCAAGAAGATGATGAAGAAGATGAGGAATATGACCAAATATGTGAGGAACAAGGAATTGGAATTGATCTAAAGGCTGAAGAGTTTATAGCTAAATTCTATGAACAGCTTAAACTTCAAAGACAAGTTAATACAAGAAGAAAACGTGACTAA 546 44.32 MHIMKTRQRSVVSRRAWNLLRLALLWARKGGVFVVKKRLMLDLTHFVKNLGQSKKGNGALQFGDRQLSFDATPIIHVRMHRPNSMRFRLPHIPCINPHVDCSDMFEFDDESDRYSCCEAGTSFLIANGEDCDQEDDEEDEEYDQICEEQGIGIDLKAEEFIAKFYEQLKLQRQVNTRRKRD 181
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04316 181 PANTHER AVR9-CF-9 RAPIDLY ELICITED PROTEIN-RELATED 10 176 - -
Stre1g04316 181 Pfam Cotton fibre expressed protein 153 173 IPR008480 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04316 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5211442 Stre Stre1g04310 Stre-Chr1:129244605 Stre1g04316 Stre-Chr1:129280683