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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04317 ATGATGGACGGAACCTACAATCGGCAAAGCAATATCTATTACCAGACCGACCGGAGACTGGAGATCGTAAGCGGGAAAGGAAACCAAGTTTACGCCTCCGGCGCCGGCGGAGTTAGGTCACCGGATTTTCCGGCGAGAACGTCGACGTCATCGTCGAAGCCATGGGGAGGGTTCAGTGATCCAGAGAGCAAAAGGAAGAAGAGAATCGCCAAGTATAAAGTGTACACGATTGAAGGTAGGGTGAAGGCTTCGTTCAGGAACGGGATTCGTTGGATCAAATCGAAGTGCTCTGATTTCATCCATGGATTCTGA 312 50.64 MMDGTYNRQSNIYYQTDRRLEIVSGKGNQVYASGAGGVRSPDFPARTSTSSSKPWGGFSDPESKRKKRIAKYKVYTIEGRVKASFRNGIRWIKSKCSDFIHGF 103
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04317 103 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 42 102 - -
Stre1g04317 103 MobiDBLite consensus disorder prediction 33 62 - -
Stre1g04317 103 MobiDBLite consensus disorder prediction 43 57 - -
Stre1g04317 103 Pfam Domain of unknown function (DUF3511) 58 102 IPR021899 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04317 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5190769 Stre Stre1g04317 Stre-Chr1:129292657 Stre5g03020 Stre-Chr5:108106664
5219268 Stre Stre1g04317 Stre-Chr1:129292657 Stre11g02554 Stre-Chr11:107832488