AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04324 ATGGAATCAAAAACTACGAAAATTGCTTTGCTTGTTCTTTTTTTGTCAGCGATTGTGATGCTTACTTCTGCTTCGGCTGAAAGTGGTTATGGGAAATCACAACTCGAGGGATATGTGCCACAAAAACCCACCACCCCAAAAGAGAACACTCAGTATCATGGAGCATACGACAAGACGAAGCCCAAGCTACCAACAAAACCCGTGATACCAAAAGAGGAGCATGGAGGGTATGAGAAGACTAAACCAAAGTTACCAACAAAACCCGTGGTACCAAAAGAGGAACATGGTGCTTATGATAAGAACTACCCTAAGTTACCAACAAAACCCCCATTGACACCCAAGTTACCAGAGCACCCGAAGAACATAGCAGTTCAAGGTCTTATTTATTGTAAATATGGTTCCAAACTCCTCCCACTTCAAGGAGCGACAGCTAGAGTGACTTGTTTGGCTGTGCACCAGAATGGATACGAGTCCGCCCCATTTTCATTTTCGAGTTGTCCTGCTGACAAAAAGGGTTACTTCTTGGCCAAAATACCATCATCAGCTCTTGTAAAAGACGATTTATGGGAGATCACAGAGTGCAAGGCTTTTCTAGAAAAATCACCATGGACGAGCTGCAATGTTCCCGAAGATACCAACGGAGGAATCAAGGGTGCTCGTGTTACGTTTTCTCGTCATCTCAACAGCAATGGATATTGTTTGTCGTCGGTAGGCCCGTTTATATACAATCCTGGACATGAGTCGTTACCCAAGGAAGGCTACTAA 765 44.05 MESKTTKIALLVLFLSAIVMLTSASAESGYGKSQLEGYVPQKPTTPKENTQYHGAYDKTKPKLPTKPVIPKEEHGGYEKTKPKLPTKPVVPKEEHGAYDKNYPKLPTKPPLTPKLPEHPKNIAVQGLIYCKYGSKLLPLQGATARVTCLAVHQNGYESAPFSFSSCPADKKGYFLAKIPSSALVKDDLWEITECKAFLEKSPWTSCNVPEDTNGGIKGARVTFSRHLNSNGYCLSSVGPFIYNPGHESLPKEGY 254
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04324 254 MobiDBLite consensus disorder prediction 64 101 - -
Stre1g04324 254 Pfam Pollen protein Ole e 1 like 124 218 - -
Stre1g04324 254 MobiDBLite consensus disorder prediction 38 52 - -
Stre1g04324 254 PANTHER OS01G0164075 PROTEIN 10 246 - GO:0071944(PANTHER)
Stre1g04324 254 MobiDBLite consensus disorder prediction 30 114 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04324 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5186951 Stre Stre11g02698 Stre-Chr11:110276348 Stre1g04324 Stre-Chr1:129395215
5214519 Stre Stre1g04324 Stre-Chr1:129395215 Stre1g04325 Stre-Chr1:129408963