Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04358 | ATGGATAAACATATTGACAATGTTGATAAACGGGTCGAGTGGTTGCATTCTGAACAGTATTCAGCTGCTTGTAACATTTTTGGAGATCCGCAAAAAACCACACGAATTGGGGATGAATATCAGACACAAATCCCATCTTTGATGACAAAAAATGATGATCTAAACATCTTTGAATTTGGTATGTCAATTCCTATCACATGGATTCACAATCAAGAAAACAACAAGAAAGAAACCATGAAGATTCAAGCAAATGCAAAGGGTAAATCTGGTATTGTCGGTTTGGTTCCAGTTCCTTGTTCGTCAGGCGAAGAATCTTGGAGTGCGATTGAACGTGATAGTTTCATTCTTGGCTTATATATATTTGGCAAGAATCTTCGCGTTGTAAGCAAGTTCATGGGGAATAAAGGAATTAAAAATGTGATATCTTATTACTATGGGAAGTTTTATAAAAGCAATGAACACCAAAAATGGTCAATGTATCGGAAGAAAAGAATTAGCATCGGAAAAAAGATTTTCAACGGGTGGAGGCTACATGAGCTTTTGTCTCGCTTACTTTCGGATGTGACTGATGAGTGTAAAGCTAGTCTGACACAGGTTATTAGATTTTTCGAGGCGGGAAAACTTTCGTTTGAGAAGTATGTATTTAGTTTAAGGGATATTATGGGTGTTGATCTTCTTGTACAAGCGGTAGCAATTGGCAAAGGAAAACAGGATCTTACTATCAAAACCAGAACGCGATTAAGAAGCAAAAAGATTGAATCCACATGCTCGTCTCTTAAAACAGAAGAAATTGTTAATATTTTGAAGGACCGAATCGGATTAAGCAAAGCGCGGTTAAATGAGTTCTTTTGGACAGCGGTGTGGCCTCGCCTTTTAGCACGAGGATGGCATTCTGAACAACTTAAAAACTACGCGTTCCAAAAGTCGAAGAATTTAGTGTTTCTTGCACCTGGTGTGACAAAGTTTTCTAGAAGGAGTTTGGTCAAAGGAAGTCAGTATTTTGAGTCGTTGACTGAAGTTTTGAATAAAGTTGCATCTGAACCGCACCTTCTTGACCACGAACCAGAAAAGGATCGGTTGGTGGAGCCACCTGTGACACACGGGTCGGATGATGAACAAGATTCGATGAAATGCATCGTTGTGGATACCAGTTTTGTTGGACTTGTTAAAGTCAAAGAGCTCACTAGTTTGACTGATGTTTCCAGAGAAAATGAACACGAAACAACTGAAGAATCTCGAAATGAAGATATGAATCATAACAAAGTGGAAGATTCACCAGCATGTGAAGCTGGAAACAATGTTGATCCAGATGTGCAACCAGAAAGAAAAATGAAGTTGGTATTCAAACAAAAAACAAAACGCCAAAGGGTTGATGATAATATTAATAATGAAAAGAAGCGTTCAAGGATCGTGATCGACTTGAACAACCCTCGAGTGGGTCCCGGTTCGAATGATGATAACAAATCGTCTTTTGCTAAACAATCGGTTTTATTAAAAACAACCGTTAACCAGGATCCTGACTCGTTGACTCGTGTTACTAATGGTCAACGACATAGTAGAAGAAATCGTGCATTGACCACAAAAGCGTTGGAATCCCTCGCGAATGGATTCATTAACCCGAAAAAGAAGATGAGAGAGACCGAGGATGAGACGCGTACGCGTGTTCGTGCTAAAACATCTCGTGTTTCGAGTTGTGGTGCGCGTTATTTAGTGGATGGAGCCTTTGATGGTTCGTCCCGTCTTTTCAACGAGTCTCCAAAATGA | 1764 | 39.57 | MDKHIDNVDKRVEWLHSEQYSAACNIFGDPQKTTRIGDEYQTQIPSLMTKNDDLNIFEFGMSIPITWIHNQENNKKETMKIQANAKGKSGIVGLVPVPCSSGEESWSAIERDSFILGLYIFGKNLRVVSKFMGNKGIKNVISYYYGKFYKSNEHQKWSMYRKKRISIGKKIFNGWRLHELLSRLLSDVTDECKASLTQVIRFFEAGKLSFEKYVFSLRDIMGVDLLVQAVAIGKGKQDLTIKTRTRLRSKKIESTCSSLKTEEIVNILKDRIGLSKARLNEFFWTAVWPRLLARGWHSEQLKNYAFQKSKNLVFLAPGVTKFSRRSLVKGSQYFESLTEVLNKVASEPHLLDHEPEKDRLVEPPVTHGSDDEQDSMKCIVVDTSFVGLVKVKELTSLTDVSRENEHETTEESRNEDMNHNKVEDSPACEAGNNVDPDVQPERKMKLVFKQKTKRQRVDDNINNEKKRSRIVIDLNNPRVGPGSNDDNKSSFAKQSVLLKTTVNQDPDSLTRVTNGQRHSRRNRALTTKALESLANGFINPKKKMRETEDETRTRVRAKTSRVSSCGARYLVDGAFDGSSRLFNESPK | 587 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04358 | 587 | MobiDBLite | consensus disorder prediction | 399 | 441 | - | - | |
| Stre1g04358 | 587 | PANTHER | ATROPHIN-RELATED | 16 | 440 | - | GO:0003714(PANTHER)|GO:0005634(PANTHER) | |
| Stre1g04358 | 587 | MobiDBLite | consensus disorder prediction | 348 | 373 | - | - | |
| Stre1g04358 | 587 | MobiDBLite | consensus disorder prediction | 399 | 423 | - | - | |
| Stre1g04358 | 587 | ProSiteProfiles | SANT domain profile. | 101 | 152 | IPR017884 | - | |
| Stre1g04358 | 587 | Gene3D | - | 98 | 164 | - | - | |
| Stre1g04358 | 587 | SUPERFAMILY | Homeodomain-like | 104 | 152 | IPR009057 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04358 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr1:129837864 | Stre1g04358 | Stre-Chr1:129898343 | dispersed | |
| Stre | Stre-Chr1:129898343 | Stre2g04148 | Stre-Chr2:147626757 | dispersed | |
| Stre | Stre-Chr1:129898343 | Stre1g04361 | Stre-Chr1:129917628 | proximal |