Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stre1g04363	ATGGTGTTCCTGTCAGCCATGAACATTCAAATGACATCAGCTCGAAGCTTTTCTTCAATATCATCACAACTCTCACATCGTTTCGACATACCGAAGAGGTGCTTGTTCTTCCGGCCTTCGCGAAATCAGAAACCGCATACCAAGATCGTTTGCATGGCGGAGCCTTATCTGTTGAAGAAACTTGAATCTGCTGAGAAAACTTGGAAAGAACTATCGGTTAAGTTAGCAGATCCAGATGTGGTTTCAAATCCTAGTGAGTATCAAAAGCTGGCACAATCTATGTCTGAACTTGATGAGGTTGTAGCAACATACAGAGGATTCAAGGATTGTGAAAAACAACTTGAAGAATCCAAAGTTTTGTCAAAAGACGCTGACATTGATGAAGATATGGCTGAGATGATAGCTTCTGAAATTGAATCTTTATCTGACCAACTTTTAGTTTATGAAGAAAAACTTAAGATGTTGCTGATTCCTAGTGATCCTCTGGATTCTAGAAACATCTTGCTTGAAGTACGAGCTGGTACAGGCGGTGAAGAAGCTGGACTTTGGGCTGCTGACCTTGTTCGTATGTACCAGAGGTATTGTGAAAGAAACTCATTAAAATACTCACCACTTTCATCCTCTGAGGCTGAAAGAGGAGGATACAAGACTTATGTTATGGAAGTAAAAGGTGCTAGAGTTTATAGCAAACTGAAATATGAATCAGGTGTTCATAGAGTTCAACGTGTTCCTCAAACAGAAGCACAAGGTCGTATTCATACTTCAACTGCCACCGTGGCAATCATGCCAGAGGCTGAAGAGGTTGATGTGGTTATTGATCCAAAAGATATTGAACTTACAACTGCAAGATCTGGTGGTGCTGGAGGTCAGAATGTCAATAAGGTGGAAACAGCAGTCGATCTTTTCCACAAACCAACAGGAATCAGAATCTTTTGCACAGAAGAAAGGAGTCAACTGAAAAACAAAACTCGTGCCCTTCAGTTATTGCGGGCAAAATTGTATGAAATCAAATTAAAGGAACAACAAGAGTCTCAAAGAAATCAAAGAAAATCTCAGGTTGGTAGTGGTTCGCGTTCAGAAAAGATCCGCACTTACAATTACAAGGACAACAGGGTCACTGATCACAGATTAAAGATGAACTTTGAGCTCACTTCATTTCTTGATGGTGACATTGACACAGCGATTCAGTCTTGTGCTTCTATGGAGCAAAGGGAATTACTAGAAGAGCTTGCAGATTCAGTAGGAACTGCAGCCCGATAA	1260	40.71	MVFLSAMNIQMTSARSFSSISSQLSHRFDIPKRCLFFRPSRNQKPHTKIVCMAEPYLLKKLESAEKTWKELSVKLADPDVVSNPSEYQKLAQSMSELDEVVATYRGFKDCEKQLEESKVLSKDADIDEDMAEMIASEIESLSDQLLVYEEKLKMLLIPSDPLDSRNILLEVRAGTGGEEAGLWAADLVRMYQRYCERNSLKYSPLSSSEAERGGYKTYVMEVKGARVYSKLKYESGVHRVQRVPQTEAQGRIHTSTATVAIMPEAEEVDVVIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLKNKTRALQLLRAKLYEIKLKEQQESQRNQRKSQVGSGSRSEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIDTAIQSCASMEQRELLEELADSVGTAAR	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stre1g04363	419	Gene3D	-	50	161	-	-
	Stre1g04363	419	Hamap	Peptide chain release factor 1 [prfA].	57	411	IPR004373	GO:0006415(InterPro)\|GO:0016149(InterPro)
	Stre1g04363	419	SUPERFAMILY	Release factor	66	407	IPR045853	-
	Stre1g04363	419	FunFam	Peptide chain release factor 1	335	414	-	-
	Stre1g04363	419	Gene3D	-	275	338	-	-
	Stre1g04363	419	NCBIfam	peptide chain release factor 1	53	411	IPR004373	GO:0006415(InterPro)\|GO:0016149(InterPro)
	Stre1g04363	419	Gene3D	-	163	274	-	-
	Stre1g04363	419	ProSitePatterns	Prokaryotic-type class I peptide chain release factors signature.	283	299	IPR000352	GO:0003747(InterPro)\|GO:0006415(InterPro)
	Stre1g04363	419	SMART	PCRF-a-2	119	234	IPR005139	GO:0006415(InterPro)
	Stre1g04363	419	Pfam	PCRF domain	65	259	IPR005139	GO:0006415(InterPro)
	Stre1g04363	419	MobiDBLite	consensus disorder prediction	340	367	-	-
	Stre1g04363	419	MobiDBLite	consensus disorder prediction	347	361	-	-
	Stre1g04363	419	PANTHER	LD18447P	48	413	IPR050057	GO:0009507(PANTHER)\|GO:0009658(PANTHER)\|GO:0010027(PANTHER)\|GO:0032544(PANTHER)
	Stre1g04363	419	FunFam	Peptide chain release factor 1	265	360	-	-
	Stre1g04363	419	FunFam	Peptide chain release factor 1	163	273	-	-
	Stre1g04363	419	Gene3D	-	339	414	-	-
	Stre1g04363	419	Pfam	RF-1 domain	266	376	IPR000352	GO:0003747(InterPro)\|GO:0006415(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stre1g04363	K02835	peptide chain release factor 1

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Stre	Stre-Chr1:129978047	Stre9g00229	Stre-Chr9:3753121	dispersed
	Stre	Stre-Chr1:129875971	Stre1g04363	Stre-Chr1:129978047	proximal