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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stre1g04369	ATGTCGTTTAAGAGTATACTTCAGGACATGAAGGGGGATTTTGGGAGCATTTCGAGGAAAGGTTTTGGTTTGAGGTCGAGGTCACAGAGAGTGGTGGAGGACCGATCATCGGTCATTGTTGATGCTTTGAAGCAGAGTTGTTGGGCCAACATGCCACCGGAGCTGTTACGGGATGTGTTGATGAGGATTGAGGCGTCTGAGTGTGTTTGGCCACCTCGGAAAAATGTGGTTTCGTGTGCAGGTGTTTGCAGGAATTGGAGAGAAATCATGAAAGATATTGTTAAGAATCCTGAGTTTTCTGGCAAATTGACTTTCCCGATCTCACTGAAGCAGCCTGGTTCAAGGGGATCTCTCATACAATGCTTTATAAAGCGGAACCGAAGCGCTCAAACATATCATCTCTACCTCAGTCTAAATCAAGCATCAAACGATGATGGGAAGTTTCTTCTTGCTGCAAAAAAATGCAGACGTGCTACATGCACAGATTATATAATTTCTTTAAATGCCGAAGATGTATCAAAAGGAAGCAGCACTTACATAGGAAAGTTAAGATCAAACTTTCTTGGAACTAAATTCACTGTATATGATGCCCAACCTCCAAACGGTGGAGTTTTGACTACAAAATGTCATTCTTTGAGGCCTGCGAGTATGAAACGAGTGTCACCTAGGGTTCCCGCCGGAAACTACCCGGTTTCTAACATTTCATATGAACTTAATGTCTTGGGTTCCAGGGGCCCACGAAGGATGCAGTGTGTAATGAATGCAATTCCTGCAAGTGCAATGGACCCAGGTGGAGTGGCTCCAACTCAGACCGAATTCCTCGTCAGCAATGCCGATTCATTTTCATCGATTCCGTTTTTCAGATCAAAATCTGCGCGTATCGATAATTATCAATCGGGATCATTGTTGACCGGTCAAAACGACCCGATGCTGGTTTTGAAAAACAAGGCGCCAAGGTGGCACGAACAACTGCAATGTTGGTGTCTCAATTTCAATGGGCGAGTGACTGTTGCTTCTGTGAAAAACTTTCAGTTAGTTGCTTCAACAGAGAATGGTGAACATGAAAACGTGATTATACAGTTTGGAAAAGTTGGAAAAGATGCGTTTACAATGGATTATCAATACCCGTTATCTGCTTTTCAGGCGTTTGCTATTTGTCTTAGTAGCTTTGATACCAAAATTGCGTGTGAATGA	1194	43.22	MSFKSILQDMKGDFGSISRKGFGLRSRSQRVVEDRSSVIVDALKQSCWANMPPELLRDVLMRIEASECVWPPRKNVVSCAGVCRNWREIMKDIVKNPEFSGKLTFPISLKQPGSRGSLIQCFIKRNRSAQTYHLYLSLNQASNDDGKFLLAAKKCRRATCTDYIISLNAEDVSKGSSTYIGKLRSNFLGTKFTVYDAQPPNGGVLTTKCHSLRPASMKRVSPRVPAGNYPVSNISYELNVLGSRGPRRMQCVMNAIPASAMDPGGVAPTQTEFLVSNADSFSSIPFFRSKSARIDNYQSGSLLTGQNDPMLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVASTENGEHENVIIQFGKVGKDAFTMDYQYPLSAFQAFAICLSSFDTKIACE	397

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stre1g04369	397	PANTHER	TUBBY-RELATED	43	396	-	-
	Stre1g04369	397	Pfam	F-box domain	48	92	IPR001810	GO:0005515(InterPro)
	Stre1g04369	397	Pfam	Tub family	109	392	IPR000007	-
	Stre1g04369	397	Gene3D	Tubby Protein; Chain A	106	397	IPR025659	-
	Stre1g04369	397	PRINTS	Tubby superfamily signature	228	255	IPR000007	-
	Stre1g04369	397	PRINTS	Tubby superfamily signature	163	179	IPR000007	-
	Stre1g04369	397	PRINTS	Tubby superfamily signature	179	203	IPR000007	-
	Stre1g04369	397	PRINTS	Tubby superfamily signature	313	330	IPR000007	-
	Stre1g04369	397	PRINTS	Tubby superfamily signature	375	397	IPR000007	-
	Stre1g04369	397	PRINTS	Tubby superfamily signature	354	373	IPR000007	-
	Stre1g04369	397	PRINTS	Tubby superfamily signature	331	347	IPR000007	-
	Stre1g04369	397	CDD	F-box-AtTLP-like	48	92	-	-
	Stre1g04369	397	SUPERFAMILY	Tubby C-terminal domain-like	97	397	IPR025659	-
	Stre1g04369	397	SUPERFAMILY	F-box domain	35	92	IPR036047	GO:0005515(InterPro)
	Stre1g04369	397	ProSitePatterns	Tub family signature 2.	382	397	IPR018066	-
	Stre1g04369	397	FunFam	Tubby-like F-box protein	105	397	-	-
	Stre1g04369	397	Gene3D	-	41	94	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stre1g04369	K19600	tubby and related proteins

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Stre	Stre-Chr10:66737669	Stre1g04369	Stre-Chr1:130159838	dispersed
	Stre	Stre-Chr1:130159838	Stre3g01319	Stre-Chr3:16917685	dispersed
	Stre	Stre-Chr1:130159838	Stre2g03262	Stre-Chr2:130355145	transposed

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stre9g01572	ACH	1	379	TUB Transcription Factor family	AT1G53320	67.188	0.0	506.0
	Stre9g01485	.	1	445	TUB Transcription Factor family	AT1G25280	73.128	0.0	620.0
	Stre9g02905	ACH	1	379	TUB Transcription Factor family	AT1G53320	52.97	9.61e-126	364.0
	Stre1g03176	.	1	445	TUB Transcription Factor family	AT1G25280	64.877	0.0	532.0
	Stre1g04369	.	1	406	TUB Transcription Factor family	AT2G47900	76.413	0.0	612.0
	Stre10g01723	.	30	406	TUB Transcription Factor family	AT2G47900	68.622	0.0	533.0
	Stre4g02526	.	14	397	TUB Transcription Factor family	AT1G16070	52.344	1.94e-144	414.0
	Stre2g03262	WGDA	1	445	TUB Transcription Factor family	AT1G25280	70.044	0.0	600.0
	Stre3g01319	ACH,WGDA	1	445	TUB Transcription Factor family	AT1G25280	72.271	0.0	603.0
	Stre5g02609	ACH	1	445	TUB Transcription Factor family	AT1G25280	73.568	0.0	619.0
	Stre7g02029	.	1	393	TUB Transcription Factor family	AT2G18280	60.386	1.55e-177	498.0

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Stre	Tub	1.2e-109	CL0395		TF	TUB