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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04371 ATGGAGGCTAAAAGCAAGTTATCAGCACAATGGTGGTGGTTTGACAGTCAGAGCAACACGATTCCCAGAAAATCTCCATGGTTACACTCCACTCTTGCAGAACTGGACGAGAAGACGGAAGCAATGCTAAAACTAATCGAAGAAGACGCAGATTCATTCGCGAAACGCACAGAAATGTATTACAAGAAACGACCCGAGTTAATCAACATCGTTGAGGATCTGTATCGCGCTCACCGCTCATTAGCAGAAAAATATGATCAAGTCAAATTTGAAGGCGGTAACCGCCACTTGACTCCATGGACATCATGCCCGTTACCGTTATCTAAATACCGATCATCTCCGCTAGTAAAAGAATCAGAGAAACCATACGACAGTTATTCTGAGTCTTTTGACTTTGACCATGATTATTATGATTCTGATGATTCGGTAGTTATCGACGATCTTAAACAACCAGATGAAGAAGAAGAAGAAGATCAATGTATCCAGTTTGATAAAGAAACTATTCAAGTTAAGAATTTGGATGAAGAAATATTGAATTTAAGGGAAGAAATTGAGAAATTGAGAAAAGAAAACAAGATTCAGAAAGAACAATTGATTCAGAAAGATGATGAGAAGATAGAAGCAATAAGACAACTCAGTTTTTCTGTTGATTTTCTCAAACAAGAAAATAGTATTTTGAAATCAAAAATTTCTAAAGATTGTTTCAAGAAGCAAACCAATCCTTTTGAGTTCACCAAACTGAAAGGGGTATTTTGGGGAATGGTTTTTAATGGTGAAGCTGCTGTCCCTTTATAG 795 37.11 MEAKSKLSAQWWWFDSQSNTIPRKSPWLHSTLAELDEKTEAMLKLIEEDADSFAKRTEMYYKKRPELINIVEDLYRAHRSLAEKYDQVKFEGGNRHLTPWTSCPLPLSKYRSSPLVKESEKPYDSYSESFDFDHDYYDSDDSVVIDDLKQPDEEEEEDQCIQFDKETIQVKNLDEEILNLREEIEKLRKENKIQKEQLIQKDDEKIEAIRQLSFSVDFLKQENSILKSKISKDCFKKQTNPFEFTKLKGVFWGMVFNGEAAVPL 264
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04371 264 Pfam KIP1-like protein 11 86 IPR011684 GO:0003779(InterPro)
Stre1g04371 264 PANTHER PROTEIN NETWORKED 4A 9 177 IPR051861 GO:0005774(PANTHER)
Stre1g04371 264 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 92 IPR011684 GO:0003779(InterPro)
Stre1g04371 264 Coils Coil 163 204 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04371 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
159167 Stre1g04371 Stre8g00340
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr1:130174976 Stre1g04450 Stre-Chr1:131644407 dispersed
Stre Stre-Chr1:130174976 Stre8g00340 Stre-Chr8:6700985 wgd