Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stre1g04373	ATGGCGATCACCGTCGCATCTTGCTGGTTTAATGCGCTTTACTCCGGCGGTACTTCCCGTCATACACTCTCCTTCAATCGTTTATTTTCCTCGCCGCAGATATCAGCTACTCGTTTAGTTATTCCTAAAGCAGCCAGCAAGAGTCAAAATCCGAAGAACAGAAATCCGAAGGAACATGCTCGTAAATCATCTCCTGAGAAAGAAGCTAATACACAAAAGCTTTCAAGAAGATCAAGAGATGAAAGACAGTACTCAAATGCTGATGATTACGGTGATATAAAAAATGCAGAACAACCTCAATCAACCGCCTTTAAGTCGTTTGGTACACAGAGAAAAAACGCGAAAGGTTTCATGGGTAACATGAAGGATCAACAGGGTGAGAGTGCTAAAATTCAAGATGCTTCTTTTCTCAATGCTGTTGTGAAGGTTTATTGTACGCATACCGCTCCTGATTATTCCCTCCCTTGGCAAAAGCAAAGACAATATACAAGTACAGGAAGTGCTTTCATGATTGGTGATGGAAAGCTTTTGACAAATGCTCATTGTGTTGAACATAACACACAAGTCAAAGTCAAGAGAAGAGGTGATGATACCAAGTATGTGGCTAAGGTTTTAGCTAAAGGCATGGAATGTGACATAGCTTTACTTTCAGTGGAAAATGAGAATTTCTGGAAAGGAGCCGAACCGCTTCAATTTGGTCATTTGCCTCGTCTTCAGGATCCGGTTACTGTTGTAGGATATCCACTTGGGGGAGATACTATTTCAGTGACCAAAGGGGTTGTATCTCGTATAGAGGTTACTTCGTATGCTCATGGATCAGCTGAACTGTTGGGCATTCAAATTGATGCAGCAATCAATCCTGGTAATAGTGGTGGTCCTGCTTTCAATGATCAGGGAGAATGCATCGGTGTCGCATTTCAGGTGTACAGATCCGATGATGTTGAAAACATTGGCTATGTAATTCCAACAACGGTCGTGTCTCATTTTTTGGATGATTATGAGAGAAATGGGAAGTACACTGGTTTCCCTTCTCTTGGAATATTATTGCAAAAGTTAGAGAATCCAGCTTTACGCGCCTGCTTAAAAGTCCCATCTAACGAGGGCGTACTTGTCCGTCGTGTGGAGCCCACTTCTGGTGCCAGTAATGTCTTGAAGGAGGGGGATGTAATTGTAAGCTTTGATGGTGTAGAAGTTGGTTCAGAAGGGACAGTCCCGTTTCGGTCAACCGAACGCATTGCATTCCGCTATCTCATTAGTCAAAAATTCACTGGGGATATAGCAGAGATTGGTATCATAAGATCAGGGGCTTTTATGAAAGTTCACACTGCTATGAATCCACGTGTTCATTTGGTACCGTATCATATTGAAGGCGGTCAACCATCATACTTGATAGTAGCTGGTTTAGTTTTTACTCCTCTTTCAGAACCACTGATAGACGAGGAATGTGAAGATAGCATAGGGTTAAAATTATTGACAAAGGCACGGTACTCAATGGCAAGGTTCAAAGGAGAACAGATTGTGATCTTATCACAGGTATTGGCAAATGAAGTCAATATTGGATACGAGGATATGAGCAACGAGCAGGTTCTGAAGTTCAATGGAACTCGAATAAAGAACATTCACCATCTTGCTCATCTTGTTGATTCATGCACGGATAAATACTTGGTTTTTGAATTTGAAGACAATTATCTGGCGGTTTTAGAGAGAGAAACTTCTACATCTGCATCACCATGCATTCTAAAAGATTATGGCATACCATCAGAGAGATCATCTGATCTTCTAGAACCATACGTGGACCCCGTTGGTGAAAACCAAATACCCGAAAACCACGATCTTGGTGACAGTCCTGTCATTAACTCAGATATCGGGTTTGATGGGCTTCAATGGGCTTGA	1893	41.89	MAITVASCWFNALYSGGTSRHTLSFNRLFSSPQISATRLVIPKAASKSQNPKNRNPKEHARKSSPEKEANTQKLSRRSRDERQYSNADDYGDIKNAEQPQSTAFKSFGTQRKNAKGFMGNMKDQQGESAKIQDASFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHNTQVKVKRRGDDTKYVAKVLAKGMECDIALLSVENENFWKGAEPLQFGHLPRLQDPVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSAELLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSDDVENIGYVIPTTVVSHFLDDYERNGKYTGFPSLGILLQKLENPALRACLKVPSNEGVLVRRVEPTSGASNVLKEGDVIVSFDGVEVGSEGTVPFRSTERIAFRYLISQKFTGDIAEIGIIRSGAFMKVHTAMNPRVHLVPYHIEGGQPSYLIVAGLVFTPLSEPLIDEECEDSIGLKLLTKARYSMARFKGEQIVILSQVLANEVNIGYEDMSNEQVLKFNGTRIKNIHHLAHLVDSCTDKYLVFEFEDNYLAVLERETSTSASPCILKDYGIPSERSSDLLEPYVDPVGENQIPENHDLGDSPVINSDIGFDGLQWA	630

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stre1g04373	630	PRINTS	HtrA-DegQ protease family signature	174	186	IPR001940	GO:0004252(InterPro)\|GO:0006508(InterPro)
	Stre1g04373	630	PRINTS	HtrA-DegQ protease family signature	275	292	IPR001940	GO:0004252(InterPro)\|GO:0006508(InterPro)
	Stre1g04373	630	PRINTS	HtrA-DegQ protease family signature	383	395	IPR001940	GO:0004252(InterPro)\|GO:0006508(InterPro)
	Stre1g04373	630	PRINTS	HtrA-DegQ protease family signature	196	216	IPR001940	GO:0004252(InterPro)\|GO:0006508(InterPro)
	Stre1g04373	630	PANTHER	-	46	597	-	GO:0004252(PANTHER)
	Stre1g04373	630	MobiDBLite	consensus disorder prediction	40	106	-	-
	Stre1g04373	630	Pfam	PDZ domain	451	592	IPR041517	-
	Stre1g04373	630	Gene3D	-	235	345	IPR043504	-
	Stre1g04373	630	Gene3D	-	346	442	IPR036034	GO:0005515(InterPro)
	Stre1g04373	630	Gene3D	-	448	599	IPR046449	-
	Stre1g04373	630	SUPERFAMILY	PDZ domain-like	366	445	IPR036034	GO:0005515(InterPro)
	Stre1g04373	630	FunFam	Protease Do-like 9	121	223	-	-
	Stre1g04373	630	CDD	PDZ-serine-protease	343	440	-	-
	Stre1g04373	630	Gene3D	-	120	223	IPR043504	-
	Stre1g04373	630	ProSiteProfiles	PDZ domain profile.	330	398	IPR001478	GO:0005515(InterPro)
	Stre1g04373	630	SUPERFAMILY	Trypsin-like serine proteases	136	338	IPR009003	-
	Stre1g04373	630	Pfam	Trypsin-like peptidase domain	166	304	-	-
	Stre1g04373	630	FunFam	protease Do-like 9	225	335	-	-
	Stre1g04373	630	MobiDBLite	consensus disorder prediction	52	88	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stre1g04373	K25896	protease Do-like 2, chloroplastic [EC:3.4.21.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Stre	Stre-Chr1:130198747	Stre2g05684	Stre-Chr2:171690335	dispersed