AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04392 ATGAAAATGAAGGTTTCGTTTGCCTTCACATGGTCGGCTGCTGTTCGCGCCTCTTTGTTTCTTATGCTTCTCGCTACCTTTGCGTTTGCGTGTTTCTCTCTTCCGATAGAAAAGATTTTGAAGAACTTTTTGCTGTGGATTAAGGAAGAGTTGGGTCCCTGGGGGCCACTTGTTCTTGCCATTGCTTATATTCCTCTCACGGTGTTTGCTGTTCCAGCCTCGGTGCTTACGCTTGGAGGGGGATATCTTTTTGGACTTCCAGTAGGATTTGTAGCTGATTCAATCGGTGCGACCCTTGGTGCAACGGCTGCTTTTCTTGTTGGCAAAACGATAGGTAGGTCTTATGTCATTTCTAAATTAAAAAAATATCCCAAGTTTCAGGCTATTGCTATTGCAATACAAAGATCTGGATTCAAGATTGTTTTGCTACTTCGTTTTGTTCCATTGCTTCCATTTAACGTATTGAATTACCTGTTATCTGTCACTCCTGTTCGATTATGGGAGTATATGTTGGCCACTTGGTTGGGAATGATGCCAATTACATTTATGTTTGTGTATATTGGAACAACTCTCAAGGACCTATCTGATGTTACACATGGATGGCATGAGATATCAAAAACTCGTTGGATGTATATGGCTTTTGGGCTCACAATATCAGTGATCATGATTGTTTACATAATTAAAGTTGCGAAAGCTTCTTTGGAAAAAGCATTGTCTGAAAATGGTGAGATAGACGCGATAGATCTAGACTCACCCGGTCTACCAATTGTAGTTGACTCACCACTCGGGCTTCATAGACCTTTGATAACTACAGTGGACTCAACCTTAGACGATCTTGTTTGA 843 41.28 MKMKVSFAFTWSAAVRASLFLMLLATFAFACFSLPIEKILKNFLLWIKEELGPWGPLVLAIAYIPLTVFAVPASVLTLGGGYLFGLPVGFVADSIGATLGATAAFLVGKTIGRSYVISKLKKYPKFQAIAIAIQRSGFKIVLLLRFVPLLPFNVLNYLLSVTPVRLWEYMLATWLGMMPITFMFVYIGTTLKDLSDVTHGWHEISKTRWMYMAFGLTISVIMIVYIIKVAKASLEKALSENGEIDAIDLDSPGLPIVVDSPLGLHRPLITTVDSTLDDLV 280
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04392 280 Pfam VTT domain 71 189 IPR032816 -
Stre1g04392 280 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Stre1g04392 280 PANTHER UNCHARACTERIZED 14 265 IPR015414 GO:0016020(InterPro)|GO:0016020(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04392 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr1:130455012 Stre7g01429 Stre-Chr7:72993237 dispersed