Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04407 | ATGCTCAATATTTTCAACAAAAACCTCCGGCGACTCTGCTCAAAGTTCCGGTGGCCGGTGCGCCGCCGTGCAAAGCCTAAAGTCATCATCAAAAGATTTGGAAAATCAAATTCTAGAGGTCAAGATTCATTAAACACAAATGGGTCGGCCACAATTCACCCAAATAATCATTTGGGTATTTCAAAATCATCAAACCCAATTCGAATTGCAACATTTAATGCTGCTTTATTCTCAATGGCACCAGCAGTTCCAGAGTTGACCAAAAAAGCTTCAAGCTTTGACCATGGCGAAGATGAAGAAGATTACACAAAGGTCGCCTTAAATTCCCCTACTTCTTATACTAATTCACGATCAAAATCAATGGTTGATCGTCCCAAAAGCATATTAAAGCAATCACCATTACATTCAAGCTCCATCAGCAGTTCAGAAACCTTATCAAAACAACAGAAATTCGCAAAGTCAAAACTACGTGTATCGATAAATCTACCAGACAATGAAATTTCATTGAAACGAAGCGGTCGATTAAACTTTGTTCCAGACGAAACTGAACCCGACCCGAGTTTGAAACCCAGTAGTTCCAAGGGTATAAGCAGGATTTTGAAAGGAAAAGGTGTTTTAAGATCAAATAATAGTTTTTCTTCAAGAGAATTTGAAAGTCAAAGGGGAAATTACAGGTCAACGAAGACTGTTCTTGAAGTTTTGAAAGAATTGGATGCAGATATATTGGCTTTACAAGATGTAAAAGCTGAAGAAGAAAAAGATATGAAACCATTATCTGATTTGGCTGCTGCTTTGGGTATGAATTATGTGTTTGCTGAAAGTTGGGCACCCGAATATGGTAACGCGATTTTATCGAAGTGGCCGATTAAACGATCGAAAGTTCAGAAGATTTTCGATGATTCTGATTTCAGGAATGTTTTAAAGGCGACAATTGATGTTCCACAAACCGGAGAAGTTGACTTTCAATGTACTCTTCTTGATCATCTTGATGAAAATTGGCGAATGAAGCAAATTAATGCAATAATCGAATCAAATGAGAGACCACATATTTTAGCTGGAGGTATCAACTCACTTGATGAAACAGATTACTCGCCTGAAAGATGGACCGACATTGTTAAGTATTATGAAGAAATGGGAAAACCGACACCAAAAGTTGAAGTGATGAAGTATTTAAAAAGCAAACATTACACCGATGCTAAACATTTTGCAGGCGAATGCGAATCTGTAGTTATTATCGCGAAAGGACAAAATGTGCAAGGTACATGCAAATATGGTACTAGAGTAGATTATATATTGGTGTCACCAGAATCACCGTACAAGTTTGTTCCTGGTTCGTATATGGTTTTATCGTCAAAGGGTACTTCTGACCATCACATAGTCAAAGTTGAGGTAACTAAGGTTGCGGAATCTGGTCAACAACAAATCGTTAGAAGACATCGACATCCTAAACAAAAAGTTGTGAAGATAGCGAATTCTAATTCATCAAAAGGTGTATGGAGAATACAAACTTTAGATAGATAG | 1521 | 37.54 | MLNIFNKNLRRLCSKFRWPVRRRAKPKVIIKRFGKSNSRGQDSLNTNGSATIHPNNHLGISKSSNPIRIATFNAALFSMAPAVPELTKKASSFDHGEDEEDYTKVALNSPTSYTNSRSKSMVDRPKSILKQSPLHSSSISSSETLSKQQKFAKSKLRVSINLPDNEISLKRSGRLNFVPDETEPDPSLKPSSSKGISRILKGKGVLRSNNSFSSREFESQRGNYRSTKTVLEVLKELDADILALQDVKAEEEKDMKPLSDLAAALGMNYVFAESWAPEYGNAILSKWPIKRSKVQKIFDDSDFRNVLKATIDVPQTGEVDFQCTLLDHLDENWRMKQINAIIESNERPHILAGGINSLDETDYSPERWTDIVKYYEEMGKPTPKVEVMKYLKSKHYTDAKHFAGECESVVIIAKGQNVQGTCKYGTRVDYILVSPESPYKFVPGSYMVLSSKGTSDHHIVKVEVTKVAESGQQQIVRRHRHPKQKVVKIANSNSSKGVWRIQTLDR | 506 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04407 | 506 | MobiDBLite | consensus disorder prediction | 105 | 122 | - | - | |
| Stre1g04407 | 506 | MobiDBLite | consensus disorder prediction | 176 | 195 | - | - | |
| Stre1g04407 | 506 | Gene3D | Endonuclease-exonuclease-phosphatase | 210 | 467 | IPR036691 | - | |
| Stre1g04407 | 506 | Coils | Coil | 234 | 254 | - | - | |
| Stre1g04407 | 506 | Pfam | Endonuclease-Exonuclease-phosphatase family | 221 | 457 | IPR005135 | GO:0003824(InterPro) | |
| Stre1g04407 | 506 | MobiDBLite | consensus disorder prediction | 90 | 104 | - | - | |
| Stre1g04407 | 506 | MobiDBLite | consensus disorder prediction | 90 | 146 | - | - | |
| Stre1g04407 | 506 | MobiDBLite | consensus disorder prediction | 130 | 146 | - | - | |
| Stre1g04407 | 506 | SUPERFAMILY | DNase I-like | 227 | 464 | IPR036691 | - | |
| Stre1g04407 | 506 | PANTHER | CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR | 12 | 463 | IPR051916 | GO:0005783(PANTHER)|GO:0006506(PANTHER) | |
| Stre1g04407 | 506 | MobiDBLite | consensus disorder prediction | 36 | 57 | - | - | |
| Stre1g04407 | 506 | FunFam | Endonuclease-exonuclease-phosphatase family protein | 215 | 467 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04407 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr10:24992117 | Stre1g04407 | Stre-Chr1:130717357 | dispersed |