AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04419 ATGGTGTCTTTACGCTTCCCATCGTTTCTTCAGCCCGCCACCACACGCTTCCCTTCCGGCGCATTTTCTCCGGCGAAAATCGCCTGCTCCGTCGCCGTATCTGCTGCTGTCGGAGCCGGAATTTCAGCCGGCATTTCAATCTCACAAAACTCCAATCAACCTCTTCATAACGCACTGAACTCCATCATTTCCAATCTCTCACGCTCGTCTCCCCTATGGGGATCACTGTCTCTATCCGACGGCTCTCCCGCCGGAGTCACCGAATCGAAGACCGGCGTTACGTTTCCGGTGGTTTTGAAGGACTCTCAGGGGCTTCTAGGGGTTGGATTGAGGAGGAAAGTCCTGTTTGGGCTGAAGAACATCGATGTTTACGCTTTTGGTGTGTATGCTGATGATAACGAGATAAAGAGCTTTTTAAGTGAGAAATATGGATCACTTTCAACAACTGAACTGAAGAACAACGACATCACTCAAGATTTGATGGAAAGTGATGTAAGTGTTACAGTCAGACTGCAAATAGTTTATGGAAAACTTAGTATTCGTTCTGTTCGAAATGCTTTTGAAGATTCAGTTGGAAACAGATTAAAGAAGTTTGGTGGATCTGATAACAAGGAGTTACTTCAAAAGTTCACTTCTCAGTTTAAAGACGAATACAAGATTCCTCGTGGATCGATCATCGATCTCTCCAAGGAGAAAGGATTTGTGCTCCGGACCGCTATTGACGGCAAAGAGATAGGAAGTGTCGAGAGTCAACTCTTATGTCGGTCAATCTTGGATCTTTATATTGGCGACGAACCGTTGGATGCAAAAGCAAAAGAAAACATTGACCTCAAACTCGCATCCACCGTTGCAAAGTAA 858 45.45 MVSLRFPSFLQPATTRFPSGAFSPAKIACSVAVSAAVGAGISAGISISQNSNQPLHNALNSIISNLSRSSPLWGSLSLSDGSPAGVTESKTGVTFPVVLKDSQGLLGVGLRRKVLFGLKNIDVYAFGVYADDNEIKSFLSEKYGSLSTTELKNNDITQDLMESDVSVTVRLQIVYGKLSIRSVRNAFEDSVGNRLKKFGGSDNKELLQKFTSQFKDEYKIPRGSIIDLSKEKGFVLRTAIDGKEIGSVESQLLCRSILDLYIGDEPLDAKAKENIDLKLASTVAK 285
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04419 285 SUPERFAMILY Chalcone isomerase 88 281 IPR036298 GO:0016872(InterPro)
Stre1g04419 285 Pfam Chalcone isomerase like 105 275 IPR016087 -
Stre1g04419 285 Gene3D - 134 275 IPR016089 -
Stre1g04419 285 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 283 IPR044228 GO:0005504(PANTHER)|GO:0006631(PANTHER)|GO:0009570(PANTHER)
Stre1g04419 285 Gene3D - 88 261 IPR016088 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04419 - -