AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04421 ATGTATAGCATAGGGACCGATCTACACCTACACGTACCCAATCCACACTCACACGTGTCACTCTCTCTCACATCCCTCCTCATACTCTCACTCTTCTGGTTAAACCTCCGATCAATTGATTCCTCCATGGCCAAACGCTTCAAACCTCCGTCGGATCACTTCAATATGGACGCTCTGCTGACATCGTTTCTAGCTCTCTCCGATTCACCGGCGATCAGCACCTCCTTTGACCGCCTCATCCAGTCCACGGCCTCTGATTCCGATCAGAATCGTCTGATCCAACGCGCTCTGCATCTCGGATCGATTTTGCTTGAAGCCGGAAATCGATCTGCTCGGAGGTGTTCTTCCTCGCATAACGCCGTCGTTTGGCCGCTCTCGCCGGACCTCACTATTAAGCTTTTTTCAATGCTTGATACGCAAAGTGTATGTTATGTTGCGGCTACATGCTCATTCTTTCAGAAATGTACTATGGATCCTATGTGTTATGCTAACATTGACTTGGCTACATTAGTCCCCAAAGTCAATAATGCTGTGGTGTCGACCATGATTCATCGCGCTGGATATGCACTCAAGTCTATAAAACTTGGTGTTTTACCACCCATTCCTGCACCACCTTTCTTTTCCTCTCAACCGTTAGTTTATAGCATTAGAAATGCAAATGATGCATCGGGAATTTCATGGAATGATAAGAGATCAAGGCAAGGAAAGGAATCTTCCATTTTAACAAGGTCTTGTCTGAATTTGTTGAGTGGCAATGGTGGTGCACCTGGTTATGGGGTTCATTTGAGAAGATTACACCTTTACAACATTGAAAGAATGGACAATGCATCACTCTTGACATCATTATCAGCTTGCCCATCTCTCCTTGATTTAGAAATTGTGGGCCTGCATGTTGAATTGAGGCATACATTGGAGTCAGTTAGTAGAAATTGTCCGTTAATAGAACGTTTGGTTTTTGAATCTTCAAAAACAGGTAGAGATGATGGTTTGAAATTCCCAACTTGCAATGAATTTGTCCTCAACTGTCCTAACATAACCACTTTAGCATTAAAAGGATTTAAACTACATGACTACAAGGCGCGTATGCTAGTAAAGGGGTTACGGAGATTGAAACATCTTGATCTCTCAACGTCTTACTCATTCACCGGTGCATTTTTAAAGAATGTTAGTGGCAACGGTGGTGGAGACAATTTGGAGGTGATGATTTTACGGGACTGTATGCATTTAAAAGAAATTGAAGTCGAGAGGTTTATGACCGCTGTTCTTGCAGGGGAATTCAGGCGTCTTAGACATCTTGACATATCTAACAGAGAAGGTTTAGCATGTGAGGGTGATTGGAGCAATAGATGTTACAATGTTAGTTTTATTCCTAAAGAGCAATTATTGGAACAAAGACCTGATTTTTGTTTGATAGCTGATTTTCCAAAAGGAAGTTACAATGAAATAGATCAAATGACATGCAGTGATGTAAGTTTACCATCACAGTCAAGTAGTAGCCATACATCTGATGGGTCGACCACATCAGACGGGAGTTATAATAGTGATCATGGTAGCGGTAACGAGTACGGTAGAGAAAGCGGTTTTGCAATTTACGAAGAAAATTCAGACTACCTTATGAGTTAA 1623 42.14 MYSIGTDLHLHVPNPHSHVSLSLTSLLILSLFWLNLRSIDSSMAKRFKPPSDHFNMDALLTSFLALSDSPAISTSFDRLIQSTASDSDQNRLIQRALHLGSILLEAGNRSARRCSSSHNAVVWPLSPDLTIKLFSMLDTQSVCYVAATCSFFQKCTMDPMCYANIDLATLVPKVNNAVVSTMIHRAGYALKSIKLGVLPPIPAPPFFSSQPLVYSIRNANDASGISWNDKRSRQGKESSILTRSCLNLLSGNGGAPGYGVHLRRLHLYNIERMDNASLLTSLSACPSLLDLEIVGLHVELRHTLESVSRNCPLIERLVFESSKTGRDDGLKFPTCNEFVLNCPNITTLALKGFKLHDYKARMLVKGLRRLKHLDLSTSYSFTGAFLKNVSGNGGGDNLEVMILRDCMHLKEIEVERFMTAVLAGEFRRLRHLDISNREGLACEGDWSNRCYNVSFIPKEQLLEQRPDFCLIADFPKGSYNEIDQMTCSDVSLPSQSSSSHTSDGSTTSDGSYNSDHGSGNEYGRESGFAIYEENSDYLMS 540
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04421 540 MobiDBLite consensus disorder prediction 490 520 - -
Stre1g04421 540 SUPERFAMILY RNI-like 260 437 - -
Stre1g04421 540 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 125 418 - -
Stre1g04421 540 Gene3D Ribonuclease Inhibitor 120 454 IPR032675 -
Stre1g04421 540 MobiDBLite consensus disorder prediction 490 527 - -
Stre1g04421 540 SUPERFAMILY F-box domain 113 168 IPR036047 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04421 - -