AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04450 | ATGGCTTCTTTATCAAAGGCGGATTCGAGGCGTATGTATTCATGGTGGTGGAACAGCCACATCAGCCCTAAAAATTCAAAATGGCTTCAAGAAAATCTTACAGATGTGGATATCAAAGTGAAAGCAATGATAAAGCTAATTGAAGAAGATGCTGATTCATTTGCCAGAAGGGCAGAAATGTACTACAAAAAGCGACCCGAACTTATGAAACTGGTTGAAGAGTTATATCGCGCATACCGCGCGTTAGCCGAAAGATATGATCATGCAACCGTGACTCTACGTCAGGCGCACAAAACAATGACTGAAGCTTTCCCAAATCAAATCCCGTCAGCATATGATGACTCAGCACCTAATTCTCCATATGACTCTGATCTTCAAACCCCAGATTCAAAAACCGCCAAAATTCCAAGTTTTGACCCTGATGACTTGCAGAAAAACGGGTCAACGGGAACCGCAAGAAAAGCCCTGAATTTCAGTGATTCAGAAGATGTTAACAGTAACAAAAACGGGACCCACGATCGAAACTTGTCTCGGTTCGCGAGTGGTGATGTGAATGATGAAGAGATCTTGTTACTAAAAGAAGCTTTAACCAAATTAGAAGATGAAAAAGAAGCTGGATTGAAGCAGTATCTTGAAAGTTTGGATAGATTATCCAAACTCGAATCTGAAATTTTAAAATCACAAGAAGAATCTAAAGAACTTGCTGATCGTGCAAGTAAAGCCGAAGTGGAATCTCAAGAATTGAAGAACATGTTGCAAAAATTAGAAGTTGAAAAAGAGGAAAGTCTTGATCTTTACCATCAGGCGCAAAAGAAAATTGAAGAAATTAATGAGCAAAATTTGAAGGAAGAAATTAGTAAATTAAAAGAGGAAAAAGATTCTGCTTATGATCAGTATAAACAATCTTTGAATCTAATATCAGATTTGGAAAAGAAGTTACTAGAAGCAGAGAAGGAAATTGAAACATTGAAGTTAGCAATTGCTAAATTAACCGAAGAAAAAGAAGCACAAACTACTTTATACCAGAAATGTATGGAGACTATCGCGAGTCTTGAACTTAGACTCGTGTGTGCAGAAGAAGAAACTGAAAGATTGAAAAATGAAATTGAAAATGGAGTTTTACTTTTAAAGGGTGCTGAAGAACAACGGTTACTGTTAGAAAAGTCGAACAAGAGTCTTCACATGGAATTGGAGTCAATGGAGGTCAAAATCGGTAGTCAAAATAAAGAAATTACTGAGAAACAGAAGGAATTGGGGAGGTTATGGACTTGTATCCAAGAAGAGCGGTTACGGTTTGTGGAGGCTGAAACCGCGTTCCAAACTTTGCAACAATTACACGCGCAATCTCAAGAAGAATTAAGATCAATGGCGGGTGAGTTACAAAACCGGGCCCAGATCTTACGCGAAATTGAAGTGCGTAATGAAGTTTTAGAAAATGAGATACAGAAGCAAATTGAGGAGAACAAGAATCTTAATGTGGTCAACGTATCTTCTTCAATTTCACTGAAAGAAATGCAGGCAGAGATTATTAGCTTAAAAGAAGTCAACGGGAAGCTTGAAGAAGAGGTTGACCTTCGAGTTGACCAAAGAAACGCGCTTCAGCAAGAAATCTACTGTTTGAAAGAGGAATTAAACGAGTTGAACAAGAACCATGGGTCGATTTTGGAGCAAGTTGGTTGTGTCGGGTTGAACTCGGAAAGTTTCGGGTCGTCTGTAAAAGAGTTGCAAGATGAAAATATAAATTTGAAAAAAGAATGGCAAACAGAAAAGGCTGCAAAAGAAGGTTTATTGGAGAAATTAGAAATTATGGGTCAACTTCTTGAGAGAAATGTTGTTTTGGAGAATTCGTTATCGGATTTGGGTGCTGAATTAGAAGGCGTAAGGGGTAAATTAAAGTCGCTTGAAGAATCATACCAATCGCTTTCGGAAGAAAAATCTAATATTGTGGTTGAAAAGGCGAATTTATTAGGTCAGTTACAAGTGACAACTGATAATTTGAGTCAAGTTTCAGAGAAAAACACTGTTCTTGAGAATTCACTTTTTGATGCGCATGTGAAACTTGAAATCCTGAAGCAAAAGGCGAAAAGTTTTGAAGATTCATGTCAAGTTCTTGCTGATGAAAAATCTGTACTTGTTAGTGAAAAGGGTATTTTAGTCTCACAGATGGAAATTACCGAAAAGACCTTGAAGGATCTGGAGTCGAAATACAAAGATTTACAACAGCAATATGCATTAATGGAGGAAGAAAGAGAATCTACACTACAAAAAGTGGAAGAATTGAATGCATCATTAGCTTTACAAAATCAAGAACATGTTATTTTTGCTCAAAAAAATGGCGAACAATTGCAAGCAATGAGAAGTCAAATTCAACTCCTGCAAGAAGAAAGTCAAAACAAAAACAAAGAATTTGAAGAAGAATTAGACAAAGCGTTCGGTTCCGAAATCAAAATCTTCATCTTATACAAACGCGCGTTAATCGAAAATGAAGAAAAAAACATGAAGCTGTCTGTTGAAATATCGACTCTAGTCGCACTTTTGGGGCAGTTTAAAACCGAATTGGTGAATCTTGAGGCGGAAAAGTTTGTTATTCAACAGGAGTTGTGCGTTCGGGATAAAAAGATTCGCGGGTTGCAAAACCAGATTACAAATATTTCAGAAGTGAATGAACAATTGAGATGTAAAGTGGTTGAAGGAGATGTTAACGAATCAGACTTAAGAACTCAACTGGAGAATATAAAATCTGAGTTGTCCATTGTTCAAGAAGCTTTTAAAACATTAGAGATGAAGAATTTGGTGGTTATTGAAGAGAAGAAGTCTTTGATGAACGATAATTTTGATATGAAGAACAAGATACGCGTTTCAGAAGAGGAAAATGAAATCATTTTGACTGAGGTTTTAAGTCAAAGCATTCTGTTTGAAACTTTGAAAAGTTGCATTGATGAGAAACATGAAGAAATGAGTTTGGAAAATTCAGAACATGAATTGATTACAGTTATATTTGTTCGCGATCAGTTGAGTTCGGATTTAGAGAATTTAAATAATGTGTTGGAATTAAAAGAAAATGAACACAAGGAAGCAGTTCAACAAATAATGATTTTAGAGAAAGAAAAAACGGATCTGTCTGAGATTGTAGCTGATTTGCAGAGAGAAAACAACGCGAAAATCGACATTTTGGAATGTGAAAATGAAGATCTTAAAGCTCGTTTTGCTGCTTTTGTTCCAGCTTTTGAATCTTTGAAAGATAGCATCATATCATTGGAAGATCATACATGTATCAGAACCAAAGTTCCAGAATCTGAGAACGAGGACACAAAGGATGGTGATTCTGTAACCGTGAAGCGCGATCCATTGGTTGAGTTGCAGGATCTTCAAAGCAAAGTCAAAGGCATTGAAATGGCGGTAATCGAAATGCATACGCGCTCAATGCAACAAAAGCTAGATTCGGATGCAAAGCTGGAAACCGCGATGAAACAGATCGAAGAAATAACCTCTCAAAAGATTCCCCGTCGGTCAAACAGTAAACCAAAATCAAGATCCGAGATATCCGAAGCAGACCCGAAAGACATCATGCTGGATGAAGCCTCTGAATGTTCATCATACAACATTTGGGAAACTACAAATGATTTCAAAACTGTTTCCAAACACATTCCTACCGCGTCAGACGTGTCTCTCGATAACATCGTTGTGGATAAACTAGAAGTTTCTAGAAGGTTGAAGGAATCGCGCGGTGACGAAAACAAGCGAAAGGTTCTAGAACGGTTGAATTCCGATGTTTTGAAGCTAACGAATCTTCAAATCACAATCGAGGATTTGAAACGGAAAGTCGAGATCACTTTACGGAGCAGGCGCGGAAAAGCAATGATCGAATGCGAGACTTTGAAAGGTCAACTCATGGAAGCTGAAACCGCGATCCAGAAACTATACGAGTTAAACGGGAAATTCGTAAAACAGTTAGAGGGTCATGATGCTGAAACATCAAGTTCGATGTACGATGAATCTGTTGAAATGAAATTAGATATACAAAGGATACAGTTTGTGTTGGTGAAACTCGATGAAAACGAGCACGAAACAGCGGCGAAAACGAGGTTCTTAGATGGAAATAAACGGGTTTTGTTGAAAGATTATCTTTATGGTGGCGGGGAGAACAAAGGCGACGACATTTACACATCGATTTGCCTGAACATTGATTGGGGGATAAAAATGTATGGGCTGGCAAAGTAA | 4221 | 37.67 | MASLSKADSRRMYSWWWNSHISPKNSKWLQENLTDVDIKVKAMIKLIEEDADSFARRAEMYYKKRPELMKLVEELYRAYRALAERYDHATVTLRQAHKTMTEAFPNQIPSAYDDSAPNSPYDSDLQTPDSKTAKIPSFDPDDLQKNGSTGTARKALNFSDSEDVNSNKNGTHDRNLSRFASGDVNDEEILLLKEALTKLEDEKEAGLKQYLESLDRLSKLESEILKSQEESKELADRASKAEVESQELKNMLQKLEVEKEESLDLYHQAQKKIEEINEQNLKEEISKLKEEKDSAYDQYKQSLNLISDLEKKLLEAEKEIETLKLAIAKLTEEKEAQTTLYQKCMETIASLELRLVCAEEETERLKNEIENGVLLLKGAEEQRLLLEKSNKSLHMELESMEVKIGSQNKEITEKQKELGRLWTCIQEERLRFVEAETAFQTLQQLHAQSQEELRSMAGELQNRAQILREIEVRNEVLENEIQKQIEENKNLNVVNVSSSISLKEMQAEIISLKEVNGKLEEEVDLRVDQRNALQQEIYCLKEELNELNKNHGSILEQVGCVGLNSESFGSSVKELQDENINLKKEWQTEKAAKEGLLEKLEIMGQLLERNVVLENSLSDLGAELEGVRGKLKSLEESYQSLSEEKSNIVVEKANLLGQLQVTTDNLSQVSEKNTVLENSLFDAHVKLEILKQKAKSFEDSCQVLADEKSVLVSEKGILVSQMEITEKTLKDLESKYKDLQQQYALMEEERESTLQKVEELNASLALQNQEHVIFAQKNGEQLQAMRSQIQLLQEESQNKNKEFEEELDKAFGSEIKIFILYKRALIENEEKNMKLSVEISTLVALLGQFKTELVNLEAEKFVIQQELCVRDKKIRGLQNQITNISEVNEQLRCKVVEGDVNESDLRTQLENIKSELSIVQEAFKTLEMKNLVVIEEKKSLMNDNFDMKNKIRVSEEENEIILTEVLSQSILFETLKSCIDEKHEEMSLENSEHELITVIFVRDQLSSDLENLNNVLELKENEHKEAVQQIMILEKEKTDLSEIVADLQRENNAKIDILECENEDLKARFAAFVPAFESLKDSIISLEDHTCIRTKVPESENEDTKDGDSVTVKRDPLVELQDLQSKVKGIEMAVIEMHTRSMQQKLDSDAKLETAMKQIEEITSQKIPRRSNSKPKSRSEISEADPKDIMLDEASECSSYNIWETTNDFKTVSKHIPTASDVSLDNIVVDKLEVSRRLKESRGDENKRKVLERLNSDVLKLTNLQITIEDLKRKVEITLRSRRGKAMIECETLKGQLMEAETAIQKLYELNGKFVKQLEGHDAETSSSMYDESVEMKLDIQRIQFVLVKLDENEHETAAKTRFLDGNKRVLLKDYLYGGGENKGDDIYTSICLNIDWGIKMYGLAK | 1406 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04450 | 1406 | Coils | Coil | 1261 | 1281 | - | - | |
| Stre1g04450 | 1406 | MobiDBLite | consensus disorder prediction | 1160 | 1188 | - | - | |
| Stre1g04450 | 1406 | Coils | Coil | 397 | 417 | - | - | |
| Stre1g04450 | 1406 | Coils | Coil | 217 | 382 | - | - | |
| Stre1g04450 | 1406 | Coils | Coil | 874 | 894 | - | - | |
| Stre1g04450 | 1406 | Coils | Coil | 687 | 707 | - | - | |
| Stre1g04450 | 1406 | Pfam | KIP1-like protein | 14 | 87 | IPR011684 | GO:0003779(InterPro) | |
| Stre1g04450 | 1406 | MobiDBLite | consensus disorder prediction | 1173 | 1188 | - | - | |
| Stre1g04450 | 1406 | MobiDBLite | consensus disorder prediction | 142 | 178 | - | - | |
| Stre1g04450 | 1406 | Coils | Coil | 909 | 929 | - | - | |
| Stre1g04450 | 1406 | MobiDBLite | consensus disorder prediction | 107 | 178 | - | - | |
| Stre1g04450 | 1406 | Coils | Coil | 617 | 651 | - | - | |
| Stre1g04450 | 1406 | Coils | Coil | 460 | 494 | - | - | |
| Stre1g04450 | 1406 | Coils | Coil | 722 | 770 | - | - | |
| Stre1g04450 | 1406 | ProSiteProfiles | Networked (NET) actin-binding (NAB) domain profile. | 13 | 93 | IPR011684 | GO:0003779(InterPro) | |
| Stre1g04450 | 1406 | Coils | Coil | 572 | 603 | - | - | |
| Stre1g04450 | 1406 | PANTHER | PROTEIN NETWORKED 4A | 279 | 988 | IPR051861 | - | |
| Stre1g04450 | 1406 | Coils | Coil | 530 | 550 | - | - | |
| Stre1g04450 | 1406 | Coils | Coil | 775 | 809 | - | - | |
| Stre1g04450 | 1406 | Coils | Coil | 1290 | 1310 | - | - | |
| Stre1g04450 | 1406 | MobiDBLite | consensus disorder prediction | 107 | 133 | - | - | |
| Stre1g04450 | 1406 | Coils | Coil | 1002 | 1068 | - | - | |
| Stre1g04450 | 1406 | Coils | Coil | 502 | 522 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04450 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr1:130174976 | Stre1g04450 | Stre-Chr1:131644407 | dispersed | |
| Stre | Stre-Chr1:131644407 | Stre2g03011 | Stre-Chr2:123526547 | dispersed | |
| Stre | Stre-Chr8:15903404 | Stre1g04450 | Stre-Chr1:131644407 | dispersed | |
| Stre | Stre-Chr1:131644407 | Stre2g03003 | Stre-Chr2:123324473 | transposed |