AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04459 ATGGACAGTTTATGGCAGGAGTTCAATTCCACCGGCGCATTTCAGTTGCCGGAGAGTCCACGGAAGCCGATGGAGTTCTTATCGAGATCATGGAGTGATGCTACTCTCAAAACTTTGCATTCTCCGCCTTCTCCGTTGATTTCTAGGTCGGGAACGGCCGCTGTTACCACGAGAACAAGCACAAATTCTGATACTATGCCGGAGACTACCGGTGTTTTTGGCGTCGATACGGCGGAGGAGCCGGTTACGGTGACGGAAACGATATCAGGAAGCACGTTTTCGTTTGCTTCGTCCGCCACTTCACAACTTGTGCTTGAACGAATCATGTCTCAGTCGGATGTGTCGCCGTTAGCTTCAGGGAGACTGTCACACAGTAGTGGACCACTGAATCCGTCGCACATGGAAGAAACCGACGGTCCACATATCTCACCGTCCGACGAGTACGACGACGTCGTTAAGTTTTTGCGAGCAAACAACACTCTTCAACCGTTGTTTGCCAATGGTCGAAGTGGATACGGGGCAGGTGGATGTGGCACCACCCCTGCCGGAAAGACGGTGGGACGGTGGTTAAAGGAGAGGAGAGAGAAGAAGAAAGAAGAGACGCGGGCCCACAATGCACAACTCCATGCTGCAGTTTCAGTTGCTGGAGTGGCTGCAGCAGTGGCAACCATTGCAGCTGCCACTGCTGCGGCGTCAACATCTAGTAAAGATGAACAAATGGCCAAGACTAATATGGCGGTGGCCTCAGCCGCCACTTTAGTGGCTGCACAATGTGTGGAGGCAGCTGAGGCCATGGGAGCGGAACGAGAACACCTTGTTGCCGCTGTTAGTTCAGCGGTTAACGTCAAATCTCATGGAGATATATTAACTCTTACCGCTGCAGCTGCAACCGCTCTTCGTGGCGCCGTGACGTTGAAGGCAAGGGCATTAAAGGAAGTATGGAATATCGCGGCGGTTATACCAGTGGAACGTGGACTTAAAGAAAGTAAAAGTCAAGGAAAGAACAATGGCTATTGTGAAAAGTCTCCTCTGAAGAGAACTTTTTGGGTATTTGTAATCAAGAACTCTTAG 1071 50.89 MDSLWQEFNSTGAFQLPESPRKPMEFLSRSWSDATLKTLHSPPSPLISRSGTAAVTTRTSTNSDTMPETTGVFGVDTAEEPVTVTETISGSTFSFASSATSQLVLERIMSQSDVSPLASGRLSHSSGPLNPSHMEETDGPHISPSDEYDDVVKFLRANNTLQPLFANGRSGYGAGGCGTTPAGKTVGRWLKERREKKKEETRAHNAQLHAAVSVAGVAAAVATIAAATAAASTSSKDEQMAKTNMAVASAATLVAAQCVEAAEAMGAEREHLVAAVSSAVNVKSHGDILTLTAAAATALRGAVTLKARALKEVWNIAAVIPVERGLKESKSQGKNNGYCEKSPLKRTFWVFVIKNS 356
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04459 356 MobiDBLite consensus disorder prediction 38 72 - -
Stre1g04459 356 MobiDBLite consensus disorder prediction 116 141 - -
Stre1g04459 356 MobiDBLite consensus disorder prediction 38 70 - -
Stre1g04459 356 PANTHER EXPRESSED PROTEIN 16 332 IPR040269 GO:0009734(PANTHER)|GO:0010087(PANTHER)|GO:0010305(PANTHER)
Stre1g04459 356 MobiDBLite consensus disorder prediction 116 132 - -
Stre1g04459 356 Pfam Auxin canalisation 17 324 IPR008546 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04459 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
159191 Stre1g04459 Stre6g02352
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr1:131831825 Stre2g02977 Stre-Chr2:122572247 dispersed
Stre Stre-Chr1:131831825 Stre6g02352 Stre-Chr6:83522639 wgd