AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04460 ATGGCGTTGTATACCGAATCGTTAACACCACCGACTAGTTGTTTCAACGATGGAAGCTACAAAGTGGAAAAGAAAAGTGTTCCAAAATCCTCAAGTTCTGCAACACCAAACCCGCCTTTGTTCATTGTTTATCCAACGGAAAAAGGGACGTATCCCGTTATACTCTTTCTCCATGGCTTTTCGATCCCTAATACGTCTTATAGCGACCTCTTTGAGTTTATCGCGTCTCATGGTTACATTATCGTTGCACCGGGTCAAACTTTGTTGGGGCTCTTGACGGGTTTATGTGTATTTTATGCGGTTGGTGATGTGGAGAACGCGGCCGAAACATCCTACTGGATAAACAATAACCAAGGCGAAAACCTTCGGCTTGTACTCCCACGTGACGTATCACCGGATCTTGAGAACGTAGCACTAGCCGGCCATAGCAAAGGAGGGAAAGCAGCATTTGCCCTAGCACTAGGTCATGCTAATACGAGCCTTAAGTTTAAGGCTCTCATTGGGTTAGATCCCGTTGCAGGTCGAGATACCTCAAACAGACTCGAACCCAAAATCTTAAACTACATACCCCAAAATTTCAACATACCCATGCCTATAGCCCTAATTGGGACAGGCTTAGGTGATGACGGGTGCTGCGGGTGTTTCCCACCTGCAGCCCCATGGGGATGTAACCATCCATTTTTCTTTAACGAATGCAAACCCCCTGCTTGTTATTTTGTAGCCAAGGACTTCGGTCACATGGACATGGTTAATGATTGGTTGGTTCGGTTGTCGGGTATGTTTGTGTGTAAAACCGGGAAGGGTTCGTATGCTGATATGAGGAGAGCTTGTGGAGGCATTTTTGTTGCCTTTCTCAAGACTTATATGTTTGATGATGCTGAAGATCTCACCGCAATCATTAATTCACCCGGTGTTGTTGCACCAATTAAGCTCGATCCGGTTTTATGGCTTCAATCATGA 960 45.52 MALYTESLTPPTSCFNDGSYKVEKKSVPKSSSSATPNPPLFIVYPTEKGTYPVILFLHGFSIPNTSYSDLFEFIASHGYIIVAPGQTLLGLLTGLCVFYAVGDVENAAETSYWINNNQGENLRLVLPRDVSPDLENVALAGHSKGGKAAFALALGHANTSLKFKALIGLDPVAGRDTSNRLEPKILNYIPQNFNIPMPIALIGTGLGDDGCCGCFPPAAPWGCNHPFFFNECKPPACYFVAKDFGHMDMVNDWLVRLSGMFVCKTGKGSYADMRRACGGIFVAFLKTYMFDDAEDLTAIINSPGVVAPIKLDPVLWLQS 319
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04460 319 Gene3D alpha-beta hydrolase 11 303 IPR029058 -
Stre1g04460 319 SUPERFAMILY alpha-beta-Hydrolases 39 251 IPR029058 -
Stre1g04460 319 PANTHER CHLOROPHYLLASE-2, CHLOROPLASTIC 11 315 - -
Stre1g04460 319 Pfam Chlorophyllase 12 312 IPR017395 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04460 K08099 chlorophyllase [EC:3.1.1.14]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr1:131842629 Stre6g01572 Stre-Chr6:69341730 dispersed