Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04478 | ATGATTATTTGGTTCAGATCAATGTCGAAGAATTTGCGGTTGATCGGTTTCTTGTTTATAATCTTAAACTTATCCCCTTTTGGGGAGTTTGCGATTGATGATTTTAATCAAGCATTTCCAATCATAGAACCCGATCCTGGTCATACAAAACTTCGCCTTTCTAGTGAAGGATTGGAAGCTATTAGGAGAATAACTAATCCTGTTGCAGCTGTTGCTGTAATTGGTCCATATCGATCTGGAAAATCTTTTCTGCTTAATCAACTTCTTTCACTTTCTTGTTATAAAGGGTTTGGTGTTGGCCATATGCGTGACACTAAAACAAAAGGAATATGGGTATGGGGAACTCCAGTTGAAATGGATATTGATGGAGTGAAAACGTCTGTATTTTATCTCGATACCGAAGGATTTGAAAGCATAGGGAAATCAAATGTTTATGATGACAGGATATTTGCTCTTGCTACGGTTTTGAGTTCTGTCCTTATTTATAATTTGCCCGAGACGATACGTGAAGCTGATATATCGCGCTTATCATTTGCTGTTGAGCTTGCTGAAGAGTTTTATGGAAGAGTCAAGGGCCAAGATGTTGCATTTGAACCAGCAAAACTATTGTGGCTGATACAACGTGACTTTTTACAGGGAAAATCTGTAAAAGAAATGGTTGATGAAGCTCTACGACATGTTCCTAACTCTGATGGTGACAAAAATATTGATCAGGTCAACCAGATACGCGACTCTCTAGCTATTATGGGTGACAATAGCACCGCTTTCAGCTTACCACAACCACATTTACAAAGGACGAAACTTTGTGACTTGAAAGATGGAGAGCTTGATCAGAGTTATGTTGAAAAGAGAGAACAGTTGAAAGAAGTAGTTAAATCTGTTATTCGTCCAAAGATCGTTCAGGGAAAATCACTTAATGGAAATGAATTTGTAGCTTTTCTTGAAAAGATTTTGGAAGCTTTGAATAAGGGTGAGATTCCATCCACAGGGTCTCTAGTTGAGGTATTTAACAAGAAAATATTAGAAAGATGTTTGAAGTTATACGAGGATAGTATGACAAAAGTAGATTTACCAATCTCTGAGGAATCTTTACAATCCATCCATGAAGCTTCTAGAACCGAATCCTTGAAATCTTTTGATGAACAACATTTTGGTCGTCATCATGCTAAAAAATCAGTTGAAACACTTGAAGAAGATATTGAAAAGATGTTTAAGAATTTTGTGATGGCAAACCAATATCAATCATCAAAATTATGTGAGGAGCACTATACAATGTGTGAGGACAAAATGGACCAACTTCAAGTACTCAGATTACCATCAATGGCTAAATTCAATGCGGGTTTTCTTCAATGCAATCAAACTTTTGAAGAAATGTGTGTTGGGCCTTCTAAAACCATATATGAGCAACGAATGGTGAAGATGATGGGAAAGTCAAAGTCTTTGTTTATAAAGGAATATAATCACAGATTATTCAACTGGTTGGTGGCTTTTTCACTTGTAATGGTGATCGTGGGTCGTTTTATTATAAAATTCATTTTGCTTGAAATCGGCGCGTGGATACTTTTTATATTTTTGGAGACATACACACGGATGTTTTGGTCACCCGAATCTCTTTATTACAATCCCGTTTGGCATGGCATTGTAGCAACTTGGGAAACACTCGTTTACAGCCCGATTCTTGATTTAGACAGATGGGCGATACAAATCGGATTCATTGCAATAATATTGTTATTTTACTGGCGATGTATTGGAAGAAGAAAACGCGGGTCCCATTCATTGTTACCGTTGTATGCCAGCAGTTCAAAAGTTCGGGATAGATCAGAGTAA | 1827 | 37.11 | MIIWFRSMSKNLRLIGFLFIILNLSPFGEFAIDDFNQAFPIIEPDPGHTKLRLSSEGLEAIRRITNPVAAVAVIGPYRSGKSFLLNQLLSLSCYKGFGVGHMRDTKTKGIWVWGTPVEMDIDGVKTSVFYLDTEGFESIGKSNVYDDRIFALATVLSSVLIYNLPETIREADISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVKEMVDEALRHVPNSDGDKNIDQVNQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDLKDGELDQSYVEKREQLKEVVKSVIRPKIVQGKSLNGNEFVAFLEKILEALNKGEIPSTGSLVEVFNKKILERCLKLYEDSMTKVDLPISEESLQSIHEASRTESLKSFDEQHFGRHHAKKSVETLEEDIEKMFKNFVMANQYQSSKLCEEHYTMCEDKMDQLQVLRLPSMAKFNAGFLQCNQTFEEMCVGPSKTIYEQRMVKMMGKSKSLFIKEYNHRLFNWLVAFSLVMVIVGRFIIKFILLEIGAWILFIFLETYTRMFWSPESLYYNPVWHGIVATWETLVYSPILDLDRWAIQIGFIAIILLFYWRCIGRRKRGSHSLLPLYASSSKVRDRSE | 608 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04478 | 608 | FunFam | Guanylate-binding family protein | 33 | 301 | - | - | |
| Stre1g04478 | 608 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 36 | 298 | IPR027417 | - | |
| Stre1g04478 | 608 | FunFam | Guanylate-binding family protein | 302 | 434 | - | - | |
| Stre1g04478 | 608 | ProSiteProfiles | GB1-RHD3-type guanine nucleotide-binding (G) domain profile. | 65 | 185 | IPR030386 | GO:0005525(InterPro) | |
| Stre1g04478 | 608 | Gene3D | - | 33 | 301 | IPR027417 | - | |
| Stre1g04478 | 608 | Pfam | Guanylate-binding protein, N-terminal domain | 50 | 288 | IPR015894 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Stre1g04478 | 608 | Coils | Coil | 386 | 406 | - | - | |
| Stre1g04478 | 608 | SUPERFAMILY | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 301 | 522 | IPR036543 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Stre1g04478 | 608 | Pfam | Guanylate-binding protein, C-terminal domain | 302 | 424 | IPR003191 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Stre1g04478 | 608 | Gene3D | - | 302 | 435 | - | - | |
| Stre1g04478 | 608 | CDD | GBP | 62 | 291 | - | - | |
| Stre1g04478 | 608 | PANTHER | GUANYLATE BINDING PROTEIN | 38 | 559 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04478 | - | - |