Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre1g04485 | ATGGCATCCATCTCAGCTTCCATTTCTACCTCATCACCATCATTTTCTCTGCTTCAAAAGCCCACCATCACCACCCATGCTTCTCCTGTTCTCGGATTACCATCAATGAGCAAGATGGGTAAAGTGAGATGTTCAATGGAAAGTAAGCCTGCGGTCACATCCGACGATGCATCAAAATTAAGGATGTGTGCACCGTCGTTGATGGCTGCAACGGTGGCTGCAGCCATGTCGAGCCCAGCAGCCATGGCTCTAGTGGATGAGAGATTGAGCACCGAAGGAACCGGGTTACCATTTGGTTTGAGCAACAACCTTCTCGGGTGGATCTTGTTTGGTGTCTTTGGTTTGATTTGGACGTTTTACTTTGTCTACACCGGTAGCCTTGATGAGGATGAGGAGTCTGGTTTATCGCTTTAA | 414 | 48.07 | MASISASISTSSPSFSLLQKPTITTHASPVLGLPSMSKMGKVRCSMESKPAVTSDDASKLRMCAPSLMAATVAAAMSSPAAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTFYFVYTGSLDEDEESGLSL | 137 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre1g04485 | 137 | Pfam | Photosystem II reaction centre W protein (PsbW) | 1 | 137 | IPR009806 | GO:0009507(InterPro)|GO:0009523(InterPro)|GO:0015979(InterPro) | |
| Stre1g04485 | 137 | PANTHER | PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC | 1 | 137 | IPR009806 | GO:0009507(InterPro)|GO:0009523(InterPro)|GO:0009535(PANTHER)|GO:0015979(InterPro)|GO:0042549(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre1g04485 | K02721 | photosystem II PsbW protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr1:132449052 | Stre8g00425 | Stre-Chr8:8804241 | dispersed | |
| Stre | Stre-Chr1:132446737 | Stre1g04485 | Stre-Chr1:132449052 | tandem |