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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre1g04488 ATGGCGAATTATGCCGCCGTATTGGCGCTCTTTTGCACAATCTTGTCAATTATCGGGCCCGTCACTTGTCGGGCCACCGCCACCAGCAGTCCCTCACCCTCCCCTGCCCCGTCCCCATCGTCCCCTGATGGAGAATCATTCGTAGTGCAAGGAAAAGTTTATTGTGATCCGTGCCGGATCCAGTTCCCGACAAAACTCAGCTACCCAATTCCCAACACAAAAGTTGTGCTCCAATGTCGGGACCGTGAAACCGGCAAGGAAACCTCTAAGATAGAGGGTACCAGTGATGCTAACGGGATGTATAGCATCACTGCAACCGGGGACCACGAGGAGGAGATATGTGATGTACGAATCACAGAAAGCCCTGATAGCAAGTGCCCCGAGGTGATGGATGATGAAAGCATCGCTCGAGTTTCACTTACTGATAAAAACGGAGTACGAGGCAAGACTCGCATGACGAATCCCATAGGATTCATGGTTAAAGACATCGACCCTCGTTGCAAGGAGATTCTTGCCGAGATTGGTATCACCGGAATCTAA 540 51.11 MANYAAVLALFCTILSIIGPVTCRATATSSPSPSPAPSPSSPDGESFVVQGKVYCDPCRIQFPTKLSYPIPNTKVVLQCRDRETGKETSKIEGTSDANGMYSITATGDHEEEICDVRITESPDSKCPEVMDDESIARVSLTDKNGVRGKTRMTNPIGFMVKDIDPRCKEILAEIGITGI 179
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre1g04488 179 ProSitePatterns Pollen proteins Ole e I family signature. 50 59 IPR006040 GO:0005615(InterPro)
Stre1g04488 179 MobiDBLite consensus disorder prediction 26 45 - -
Stre1g04488 179 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 9 177 IPR006041 -
Stre1g04488 179 Pfam Pollen protein Ole e 1 like 49 132 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre1g04488 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
159199 Stre1g04488 Stre6g02335
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr1:132488043 Stre6g02335 Stre-Chr6:83286391 wgd