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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00144 ATGGCAACCGCCTCCGCCACCCTATCTCCGGTCATCTTCACGGTGGTCACACCCACCCGGACCTCCTGCAGAACCACCACCACCACCACCAAAGTAACCTACATTAAGGGACTCAACTCATTTGGTGGTCTTAAAGCTCACACAACCGTCGCTTCATTGGGATCCACTGTTTCCACCGAACAACAATTTGCAAACTTTGTCTGCTCGATGAAGATGCAATCATCTCGCGGCGGCGGCGGTGGTGGAGCACTCACCGCCACGTGTAATGCGGTGGCGGAGATTTTCAGGATAGCTGCAATAATGAATGGGATAACTCTTGTTGGAGTTGCAATTGGATTTGTTCTTCTACGGATTGAAGCATCTGTTGAAGAAGCTGAGTAA 381 50.66 MATASATLSPVIFTVVTPTRTSCRTTTTTTKVTYIKGLNSFGGLKAHTTVASLGSTVSTEQQFANFVCSMKMQSSRGGGGGGALTATCNAVAEIFRIAAIMNGITLVGVAIGFVLLRIEASVEEAE 126
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00144 126 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 126 IPR053333 -
Stre6g00144 126 SUPERFAMILY PetM subunit of the cytochrome b6f complex 91 123 - -
Stre6g00144 126 Pfam PetM family of cytochrome b6f complex subunit 7 93 119 IPR012595 GO:0009512(InterPro)
Stre6g00144 126 Hamap Cytochrome b6-f complex subunit 7 [petM]. 90 122 IPR012595 GO:0009512(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00144 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr6:3576484 Stre9g01737 Stre-Chr9:31853868 wgd