AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00191 ATGGCTGAAAAATTGATCCAGAGGTTGGAGGCCGCCGTAACGCGGCTGGAATCGTTCTCCCGCGGTCCTCAGCCGCAGGCCGCCGGAGCTGACGCCGGATCAGCCTCATCGGGACCATCAATCGTCGCATATGACGATCTGATCACCGAACACGTCGATAAGGTGTCTTCTGCGGCGGAGAAGATTGGCGGACAAGTTAAGGATATTACGAGTGTTCTCAAGGATGCGTTTCTCGCTCAGAAGGAGCTTCTCGTTAAGATCAAACAAACGCAGAAACCTGATGCTGGAGGAATGGCAGAATTTCTAAAGCCGTTAAATGAAAAATTAAATGAAGCAACTCGCATGACAGAAGGACGTCGCTCTGATTTCTTCAATCACCTAAGATCTGTTGCTGAGAGTCTTACAGCTTTGGCATGGATCGCGTATACTGGGAAAAACTGCGGAATGAGCATGCCTATATCACATGTTGAAGAATGTTGGCAGTCAGCTGAGTTTTACAGTAACAAGGTTCTTGTAGAATACAAAAACAAAGATCCAAATCATGCGGAATGGGCAAAAGCTCTCAAGGAACTTTATGTACCAGGGTTACGGGATTATGTTAAGACTCACCATCCTTTGGGACCCGTTTGGAGTGCAACCGGGGCAACTGTAACCGCTCCATCAAAGTCAGGTGCTCCTTCTGCTCCAAATCCACCTCCAGCTTCACTTGCCAGCTCATCATCTTCATCATCAGCATCTTCATCTCGTCCACAACAAGGGATGGCTGCTGTTTTTCAGGAAATTAGTTCAAAACCCGTTACTTCGGGATTAAAAAAAGTTACAGATGATATGAAGACGAAAAACCGCACAGATAGAGCAGGATTTGTGAGTTCTGGTGAAAAGGAAGTCCGCAAGACTGCGCCCCCAGCTGCTAAAGTTGGTCCTCCGAAATTTGAGCTTGTAATGGGCCGCAAATGGGTCGTTGAGAATCAAATTGGCGTGAAAGATTTATCGATTGATGAATGTGATCCAAAACAGACAGTTTATATTTTTGGATGCAAAGATTCAGTTCTTCAGATTAAAGGGAAAGTTAACAACATAACTGTTGACAAATGCACAAAAATGGGTGTTTTATTTACGGATGTTGTTGCTGCTTTTGAGATTGTTAATTGCAGCAGTGTTGAGGTGCAATGTCAGGGTGCAGCTCCTACCATTTCAATAGACAACACAGCAGGTTGCCAGCTGTACTTGAGCAAAGATTCTCTAGAATCTTCCATCACAACTTCCAAGGCAAGTGAAGTTAATGTCTTGGTACCCCCCAAAGATCCTGATGCTGATATGGATGAACATGCTATGCCACATCAGTACATTCACACTTACGAGAATGGCCACTTTGTTACAACCCCGGTCTCTCACTCTGGAGCTTAA 1407 45.2 MAEKLIQRLEAAVTRLESFSRGPQPQAAGADAGSASSGPSIVAYDDLITEHVDKVSSAAEKIGGQVKDITSVLKDAFLAQKELLVKIKQTQKPDAGGMAEFLKPLNEKLNEATRMTEGRRSDFFNHLRSVAESLTALAWIAYTGKNCGMSMPISHVEECWQSAEFYSNKVLVEYKNKDPNHAEWAKALKELYVPGLRDYVKTHHPLGPVWSATGATVTAPSKSGAPSAPNPPPASLASSSSSSSASSSRPQQGMAAVFQEISSKPVTSGLKKVTDDMKTKNRTDRAGFVSSGEKEVRKTAPPAAKVGPPKFELVMGRKWVVENQIGVKDLSIDECDPKQTVYIFGCKDSVLQIKGKVNNITVDKCTKMGVLFTDVVAAFEIVNCSSVEVQCQGAAPTISIDNTAGCQLYLSKDSLESSITTSKASEVNVLVPPKDPDADMDEHAMPHQYIHTYENGHFVTTPVSHSGA 468
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00191 468 MobiDBLite consensus disorder prediction 269 303 - -
Stre6g00191 468 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 308 467 IPR036223 -
Stre6g00191 468 Pfam CAP N-terminal conserved motif 3 38 IPR013992 GO:0003779(InterPro)|GO:0007010(InterPro)
Stre6g00191 468 MobiDBLite consensus disorder prediction 234 254 - -
Stre6g00191 468 MobiDBLite consensus disorder prediction 17 37 - -
Stre6g00191 468 FunFam Adenylyl cyclase-associated protein 40 215 - -
Stre6g00191 468 Pfam CAP, N-terminal domain 44 207 IPR053950 -
Stre6g00191 468 Pfam Adenylate cyclase associated (CAP) C terminal 308 465 IPR013912 GO:0003779(InterPro)|GO:0007010(InterPro)
Stre6g00191 468 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Stre6g00191 468 Gene3D - 40 215 IPR036222 -
Stre6g00191 468 SMART carp 384 421 IPR006599 -
Stre6g00191 468 SMART carp 346 383 IPR006599 -
Stre6g00191 468 Gene3D - 307 467 IPR016098 -
Stre6g00191 468 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 3 466 IPR001837 GO:0003779(InterPro)|GO:0003779(PANTHER)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER)
Stre6g00191 468 MobiDBLite consensus disorder prediction 271 292 - -
Stre6g00191 468 MobiDBLite consensus disorder prediction 217 254 - -
Stre6g00191 468 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 40 233 IPR036222 -
Stre6g00191 468 ProSiteProfiles C-CAP-cofactor C-like domain profile. 308 445 IPR017901 -
Stre6g00191 468 FunFam Adenylyl cyclase-associated protein 307 467 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00191 K17261 adenylyl cyclase-associated protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
160525 Stre5g02742 Stre6g00191
160526 Stre5g02744 Stre6g00191
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr5:103744574 Stre6g00191 Stre-Chr6:4975145 dispersed
Stre Stre-Chr5:103737209 Stre6g00191 Stre-Chr6:4975145 wgd
Stre Stre-Chr6:4975145 Stre9g01716 Stre-Chr9:31352502 wgd