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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00196 ATGACTTTCAGCTTTGCATCTTGGGTTCTTTTCCTTCTTCTCACTCTAATTCACGTGAAAGGAGATGAAGCTAATGTCATAAGACTCAATACCATGGATGATGACGGTCACTATGCCCATAATCATGACCATATGCACCAAGACCATGTTCATAGTCATCATCCATCATCATCATCATCATCCGCAAATCAAAAAGACCCTCGACTCATGGTGTTCTTCATGTTACAAGATCTAAAAGTTGGCGAAATCATGCCAATTCACTTCCCAAACCGACACATTTCCCCATCTAAACTTCTATCTAAACACGAAGCCGATAACATCCCTTTTTCACTAGCTGAATTACCAAACCTTCTTCGTTTGTTCTCGGTCACACAAGGCTCACCACAAGCCGAAGCCATGGAAAGCACGCTCACAGAATGCGAGGTCAAGCCGATCAAGGGCGAGACCAAACGTTGTGCAACATCTTTGGAATCCGTGCACGAGTTCACACGCGATATATTCGGATCCGACACTAGAGTAAAAACTTTGACCACAACCCACCTCAAAAATCCACCAAGTGGACTTTTACAAAACTATAAAGTTATTTCAATCTCACAAAACATACCATGTCCAAAGTTAGTGGCTTGTCACACCATGCCATACCCATATGCGATATTTTATTGCCATAGCCAAGAAAGTGAGAACAAAGTGCTCATGGTTTCCTTAGAAGGCGAAGATGGCGATATGGTCGAGGCGTTGAGTGTTTGCCACATGGACACGTCTCAGTGGAGCCGTAGTCATGTCTCGTTTAGCGTGCTTGGGGTCGAGCCGGGGACCACTTCGGTTTGTCACTTCTTTCCTAGTGATAATTTCGTGATGATACCTTATTCTGCAACAATGTAA 882 43.76 MTFSFASWVLFLLLTLIHVKGDEANVIRLNTMDDDGHYAHNHDHMHQDHVHSHHPSSSSSSANQKDPRLMVFFMLQDLKVGEIMPIHFPNRHISPSKLLSKHEADNIPFSLAELPNLLRLFSVTQGSPQAEAMESTLTECEVKPIKGETKRCATSLESVHEFTRDIFGSDTRVKTLTTTHLKNPPSGLLQNYKVISISQNIPCPKLVACHTMPYPYAIFYCHSQESENKVLMVSLEGEDGDMVEALSVCHMDTSQWSRSHVSFSVLGVEPGTTSVCHFFPSDNFVMIPYSATM 293
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00196 293 ProSiteProfiles BURP domain profile. 72 289 IPR004873 -
Stre6g00196 293 SMART BURP-2 70 289 IPR004873 -
Stre6g00196 293 MobiDBLite consensus disorder prediction 38 64 - -
Stre6g00196 293 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 45 289 IPR044816 -
Stre6g00196 293 MobiDBLite consensus disorder prediction 38 53 - -
Stre6g00196 293 Pfam BURP domain 71 287 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00196 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr6:5117877 Stre9g01723 Stre-Chr9:31626710 dispersed
Stre Stre-Chr6:5117877 Stre6g00198 Stre-Chr6:5303643 proximal