AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00205 ATGGAGCTCCGGTCAATCCAGTCGCCGGTTGTCAGTAGCATTCCTACAAAAGGCTCCATTGAAAACCATCAGCTCATATGCTACCGTCAACTCATCAAATCGTTAGGTACGAAGAGAATCGCTCGATCAAATGCCGTGAAGTTTAAACCTGTTCGGTTTAACGTTCAAGCCTCCGGTACAGCAACTGTTGGTGTACAGCCTGCTGAAACAAAAACAAAAGATGGTGAGAAAGATGAAAATCTCATATTTGTTGCAGGAGCAACTGGCAAAGTTGGTTCACGAACCGTAAGGGAGCTGTTGAAATTAGGATTTAATGTTCGAGCTGGTGTAAGAAGTACTCAAAGAGCAGAATCTTTGGTGAAGAGCGTGCAGCAGTTGAAGCTTGATGACGCGGTATCTGATGGAATTCAGCCTATAGAGAAGTTTCAACTTGTGGAATGTGATTTGGAGAAACCAGAACAAATCAAGCCCGCATTAGGTAACGCTTCAACAGTTATATGCTGCATTGGCGCGAGTGAGAAGGAAATATTTGATGTTACCGGGCCCTACCGAATTGATTTTCTAGCCACCAAAAACCTTATTGATGCAGCTGCTGCTGCAAAGGCGAAACACTTTATTTTGGTGACTTCTTTGGGAACAAACAAGTTTGGATTTCCTGCTGCTGTGTTAAATTTGTTTTGGGGAGTCCTATGTTGGAAAAGGAAAGCTGAAGAAGCACTACTTGCTAGTGGGATTCCTTACACTATAGTAAGACCTGGAGGTATGGAACGACCTACAGATTCCTTCAAGGAAACACATAATCTTACCCTCTCTCCTGGAGACACTTTATTTGGTGGTCTTGTTTCTAATTTACAGGTGGCTGAACTTCTTGCGTTTATGGCTAAAAACCCCGATCTTTCATATTGTAAAGTAGTTGAAGTAGTTGCAGAAACAACCGCACCATTGACCCCCATGGGTGACCTTTTAACAAAAATACCACCTGAACGCGCTATACCCAACAAACCTAAGGATCCGGAAGCTATCAAAGAACCTGAACCAGAAGCTATCAAAGAACCTGAACCTGTTTTTAAGAGCACCGTATCTGAGAGTTCAAGCATTGCAACTGAAACACAATCTCAGTCAAAACCTGCTTCCACGAGACCACTTTCCCCATATACCGCTTATGAAAGTTTGAAGCCTCCTTCATCACCAACTCCAACGCCACCTGGCGGAATTAAGGCGGTAGTTGAAGCAGTATCAGCTCCTCCAACTGATTCTGAAACTACCATAAAATCAGAAACAGTTAGTATTACAACCGAACCCGCACCAGTGGCTGAAGGATTGCAGAAAACCAGACCGCTATCTCCTTATACCGCTTATGAGAGTCTGAAACCACCTTCATCTCCAACACCAACACCAAGTGGATCCAAACAAACACCATCTTTTTCTTCTGCAACACCAGAAGCAGCAGAATCTACTACAGTTGTTGATGATCCTGCAAAAATTGAAGATGAAATTGAAGTCAAAGAAGATCCTCCTCAAATTTTGACTTCCAGTAATTCACCCTACTATGTATACGAAAATCTGAAGCCTCCAACATCACCATCTCCAAGTACCCCGTCAGTATCACCACCACCACCGCCACCAACATCAACAACAACTTCCCTTGTAGAAAACGGGTCTCCAGTTGCTTCCACACCAGAAGATACCTTAGATCACTCAACACCGAAACCTAAGCCGCTTTCACCATACCCCATGTATGAAAACTTGAAGCCTCCAAGTTCTCCTACTCCTTCCACTCCTCAATAA 1788 43.62 MELRSIQSPVVSSIPTKGSIENHQLICYRQLIKSLGTKRIARSNAVKFKPVRFNVQASGTATVGVQPAETKTKDGEKDENLIFVAGATGKVGSRTVRELLKLGFNVRAGVRSTQRAESLVKSVQQLKLDDAVSDGIQPIEKFQLVECDLEKPEQIKPALGNASTVICCIGASEKEIFDVTGPYRIDFLATKNLIDAAAAAKAKHFILVTSLGTNKFGFPAAVLNLFWGVLCWKRKAEEALLASGIPYTIVRPGGMERPTDSFKETHNLTLSPGDTLFGGLVSNLQVAELLAFMAKNPDLSYCKVVEVVAETTAPLTPMGDLLTKIPPERAIPNKPKDPEAIKEPEPEAIKEPEPVFKSTVSESSSIATETQSQSKPASTRPLSPYTAYESLKPPSSPTPTPPGGIKAVVEAVSAPPTDSETTIKSETVSITTEPAPVAEGLQKTRPLSPYTAYESLKPPSSPTPTPSGSKQTPSFSSATPEAAESTTVVDDPAKIEDEIEVKEDPPQILTSSNSPYYVYENLKPPTSPSPSTPSVSPPPPPPTSTTTSLVENGSPVASTPEDTLDHSTPKPKPLSPYPMYENLKPPSSPTPSTPQ 595
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00205 595 MobiDBLite consensus disorder prediction 506 520 - -
Stre6g00205 595 MobiDBLite consensus disorder prediction 357 393 - -
Stre6g00205 595 MobiDBLite consensus disorder prediction 330 352 - -
Stre6g00205 595 Gene3D - 78 325 - -
Stre6g00205 595 MobiDBLite consensus disorder prediction 490 504 - -
Stre6g00205 595 MobiDBLite consensus disorder prediction 319 595 - -
Stre6g00205 595 MobiDBLite consensus disorder prediction 526 545 - -
Stre6g00205 595 MobiDBLite consensus disorder prediction 571 595 - -
Stre6g00205 595 CDD SDR-a5 82 311 - -
Stre6g00205 595 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 81 325 IPR036291 -
Stre6g00205 595 MobiDBLite consensus disorder prediction 546 564 - -
Stre6g00205 595 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 1 594 IPR044719 -
Stre6g00205 595 FunFam Protein TIC 62, chloroplastic 78 328 - -
Stre6g00205 595 MobiDBLite consensus disorder prediction 467 484 - -
Stre6g00205 595 Pfam NAD(P)H-binding 86 297 IPR016040 -
Stre6g00205 595 MobiDBLite consensus disorder prediction 415 432 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00205 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr1:130991733 Stre6g00205 Stre-Chr6:5352759 dispersed