AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00206 ATGGATCAACCGGAGAAGCCGTCGGAAGCCAAGAGAACCACCGTCGGACCACCCTCCGTTTCGGCTTACCTCGACCCTAATTACTGGAATGAGAGGTTTACTTCTGAAGATCATTATGAATGGATGAAAGATTACTCCCATTTTCGTCATCTGATCCAGAAACATATCAAGCTAGATTCTGCAGTATTGGAGCTTGGTTGTGGAAGCTCACAACTGTCTGATGAGTTATATAACGAAGGAATTACTAATATAACCTGCATTGATTTATCTTCGGTTGCAGTTGCGAATATGAAAAAACGATTGTTTTCTAAAGGCTATAAAGATATTAAAGTGTTGGAAGGCGATATGTTAAATCTTTCATTTACTGATGAATCCTTTGATGTTGTTATAGAGAAGGGAACCATGGATGTTTTGTTCGTGAACAGTGGCGACCCGTGGGACCCACGACCTGAAGCTGTAAACAAAGCAATGGAGATGCTTCAAAATGTTCATAGGGTTTTAAAAACCCATGGTATTTTCATCTCAATCGCTTTTGGTCAGCCACACTTCAGACGTCCATTATTTAATGCCCCTGAGTTTACATGGTCTGTTGAATACACTACTTTTGGAGATGGATTTCATTATTTCTTTTATATTCTAAGAAAGGGATGCAAATCATTAGATGCTGATACAGATGTCAAGAAAATTGAAACACCATCTTTATGCCTGTTTCAAGATGAATTAGATAACGAAGATTATTTATTTCGTACCAACATTGATTAA 762 38.19 MDQPEKPSEAKRTTVGPPSVSAYLDPNYWNERFTSEDHYEWMKDYSHFRHLIQKHIKLDSAVLELGCGSSQLSDELYNEGITNITCIDLSSVAVANMKKRLFSKGYKDIKVLEGDMLNLSFTDESFDVVIEKGTMDVLFVNSGDPWDPRPEAVNKAMEMLQNVHRVLKTHGIFISIAFGQPHFRRPLFNAPEFTWSVEYTTFGDGFHYFFYILRKGCKSLDADTDVKKIETPSLCLFQDELDNEDYLFRTNID 253
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00206 253 Gene3D Vaccinia Virus protein VP39 21 230 IPR029063 -
Stre6g00206 253 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 15 216 IPR051419 -
Stre6g00206 253 CDD AdoMet-MTases 62 178 - -
Stre6g00206 253 FunFam EEF1A lysine methyltransferase 4 21 232 - -
Stre6g00206 253 Pfam Methyltransferase domain 59 177 IPR025714 -
Stre6g00206 253 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 216 IPR029063 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00206 K22857 EEF1A lysine methyltransferase 4 [EC:2.1.1.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr5:59504260 Stre6g00206 Stre-Chr6:5427189 dispersed