AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00208 ATGAAATTCAACGAAATTTCCCATTTTAGCCACCTTCACCACCGGCTCAAACCGGGCTACACCGAGGTCCCATTCAAGTGCGATGGTTGCAAGGAAGTCGGGATCGGGTCCAACTACAAATGCACAACATGCAACTATGACTTACACGTCCATTGTGCCCTCCCATCTTCTTCTATCACCCACCCTTTCTACACTAAATGTTCGTTCCAATTCTTATCGCGCCCTCCAGGCTCCATACCGCGTTACTGCAACGCGTGTGAGAAAGCAGTGTCAGGGTTCGTTTACCATTGCAAGTTGTGTGGGTTCGACCTTCACCCATGTTGCGCCAAGCTTCCAACTATGTTGGATGATGGTGAGGTGGAATTGTACTTGTACCGAAAAGTGGGGTCCGCCTGCCATAGGTGTGGCAGGAAAGGACGAAGTTGGAGTTACAGGTCAACGTGCAAGAAGTACAATCTCCATGTGGCTTGTGTGAAAGAGTTGTTAGTGGAAAGTTGGCATGAAATCTATTTTGGTAGGGGTGGAGTGAACGGTAATTACCACGATTCGTGTGGGCAAAATGGTAAATTTGAGACAAGAATCCCAAGTTTGAAGGGTACATTGGAAAGCTATCATCATAATCATCGTCAAAGCAAAGGGAAAGTGAAGAAATGTTGTGAGATGGCCGGTTTAGCAATGCAATTTGTGATTTCGGCGGTTCTTGGTGATCCGACCACTTTAATCGCGGGTGTTGTGGGTGCTTTGATGTCGAAATAG 756 46.96 MKFNEISHFSHLHHRLKPGYTEVPFKCDGCKEVGIGSNYKCTTCNYDLHVHCALPSSSITHPFYTKCSFQFLSRPPGSIPRYCNACEKAVSGFVYHCKLCGFDLHPCCAKLPTMLDDGEVELYLYRKVGSACHRCGRKGRSWSYRSTCKKYNLHVACVKELLVESWHEIYFGRGGVNGNYHDSCGQNGKFETRIPSLKGTLESYHHNHRQSKGKVKKCCEMAGLAMQFVISAVLGDPTTLIAGVVGALMSK 251
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00208 251 Gene3D - 78 111 - -
Stre6g00208 251 ProSiteProfiles Zinc finger phorbol-ester-DAG-type profile. 13 67 IPR002219 -
Stre6g00208 251 Pfam C1 domain 9 53 IPR004146 -
Stre6g00208 251 Pfam C1 domain 72 109 IPR004146 -
Stre6g00208 251 SUPERFAMILY Cysteine-rich domain 30 114 IPR046349 -
Stre6g00208 251 Gene3D - 12 58 - -
Stre6g00208 251 PANTHER CYSTEINE-HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 249 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00208 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr6:5474826 Stre9g03249 Stre-Chr9:103035761 transposed
Stre Stre-Chr6:5474826 Stre9g03231 Stre-Chr9:102543290 transposed