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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00217 ATGATTTACCTGTTTTTCGCTGTTCTATTCGTCGAAATGTTGACGATTTTGTTACTTCTGTTCAAAACCCCACTCCGAAAGCTTCTGATAATCGGATTAGATCGTGCGAAACGAGGAAGAGCTCCGTTGGTTGTGAAATCCGTCGGTTCCACTGTTTTCGTGATCATGATGTACAACGTTTATAGCGTGACGGAAATTCAGAGCCGTCCGGCTGAAGTGATTAATCCGACCGATCAGATTATTCTGGCTTACCATATGCTTGAAGCTTCTCTCATGGGATTCTCCCTTTTTCTATCACTAATGATAGATAGACTGCATCATTACATAAGAGAATTAAGAATACTCAGAAAAACAATGGAAACCGCAAAGAAACAAAACCGAGCAGCGGAAGAAAACAAAAACAAAGGTGCAGATGAGGTTAAACTCCTAACCGATGAAATATCCAAATTAAAAACACAAATTAAAAAACTGGAATCTGAACATGACACAAAGGAAAAAGAGATCAAATCTGCAGAAGCTAATTCACACGCGCTCAAGAACCAATCAGAAGGTTTTCTTCTCGAATATGATCGTTTGTTAGCAGAAAATCAAAATCTCAGAGATCAATTGCGGGCAATTGATGAAAGCGCGTCTCATTCAAGCGGAAAGAAGAATATGTGA 660 39.24 MIYLFFAVLFVEMLTILLLLFKTPLRKLLIIGLDRAKRGRAPLVVKSVGSTVFVIMMYNVYSVTEIQSRPAEVINPTDQIILAYHMLEASLMGFSLFLSLMIDRLHHYIRELRILRKTMETAKKQNRAAEENKNKGADEVKLLTDEISKLKTQIKKLESEHDTKEKEIKSAEANSHALKNQSEGFLLEYDRLLAENQNLRDQLRAIDESASHSSGKKNM 219
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00217 219 Gene3D - 136 199 - -
Stre6g00217 219 Coils Coil 105 181 - -
Stre6g00217 219 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 200 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
Stre6g00217 219 FunFam B-cell receptor-associated protein 29 136 199 - -
Stre6g00217 219 Coils Coil 189 209 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00217 K14009 B-cell receptor-associated protein 31
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Event-related genes

Select Gene_1 Gene_2 Event_name
160580 Stre6g00217 Stre9g02860
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr2:142960997 Stre6g00217 Stre-Chr6:5824485 dispersed
Stre Stre-Chr6:5824485 Stre6g03414 Stre-Chr6:100169680 dispersed
Stre Stre-Chr6:5824485 Stre3g01057 Stre-Chr3:13887454 transposed