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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00241 ATGGACGAGGTGATCACCATGGCTGATGCGGCGTACCGCGCTAGCAAGGCGACGGAGACGGCGGCGACACCTTCTTCATCAGCTCAGGTCCTGCCGTACAGTGTCCCGCTGTTATCAGCATTCCTTGCATTTGCAATTGCTCAATTTCTCAAGGTCATCACCACCTGGTATAAAGAAAAGAAATGGGATCCTAAAAAGATTGTGGGTTCAGGTGGAATGCCCTCATCTCATTCTTCAACTGTTGTGGCACTAGCAGTATCCATTGGTCTACATGATGGAGTTGAATCATCATCATTTGCAATTGCTGTTATTATGGCTTTTATTGTTATGTATGATGCATCTGGAGTCAGACTCCATGCGGGTCGCCAGGCTGAATTATTGAACCAAATTGTATGTGAATTTCCTCCAGAACACCCGTTATCCACATCAAGACCATTACGCGATTCTCTTGGGCATACTCCATTACAGGTGATTGCAGGGGCCATGTTAGGATTCATAGTGGCAATTATGATGAAAGCATCTGAGTAA 528 45.83 MDEVITMADAAYRASKATETAATPSSSAQVLPYSVPLLSAFLAFAIAQFLKVITTWYKEKKWDPKKIVGSGGMPSSHSSTVVALAVSIGLHDGVESSSFAIAVIMAFIVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLSTSRPLRDSLGHTPLQVIAGAMLGFIVAIMMKASE 175
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00241 175 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 6 173 IPR003832 -
Stre6g00241 175 CDD PAP2-like 37 169 - -
Stre6g00241 175 Pfam Divergent PAP2 family 36 167 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00241 K09775 uncharacterized protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
435538 Stre6g00234 Stre6g00241
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr11:686337 Stre6g00241 Stre-Chr6:6490697 dispersed
Stre Stre-Chr2:176786258 Stre6g00241 Stre-Chr6:6490697 dispersed
Stre Stre-Chr5:96216036 Stre6g00241 Stre-Chr6:6490697 dispersed
Stre Stre-Chr6:6206941 Stre6g00241 Stre-Chr6:6490697 dispersed
Stre Stre-Chr6:6490697 Stre9g00555 Stre-Chr9:8759695 dispersed
Stre Stre-Chr6:6417483 Stre6g00241 Stre-Chr6:6490697 proximal