Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre6g00242 | ATGGCTTCAAGTTCTGAAATAGGGCTTGCAGCAGCTATAAACATCCTCACTGCATTTGCATTTCTAATAGCATTTGCTATACTTCGAATTCAACCTTTAAACGATAGGGTTTATTTTCCAAAATGGTATTTAAAGGGATTAAGAAACAACCCAATTCAAACCGGTGCATTTGTGCAAAAGTTTGTAAATTTGGATTTTAGATCATATTTGAGGTTTCTGAACTGGATGCCTGCTGCATTGCACATGCCAGAACCTGAACTTATTGATCATGCTGGATTGGATTCTGTTGTTTATTTGAGAATTTACTTGACAGGACTCAAGATATTTGTTCCAATTGCATGTCTTGCTTTCACAATCATGGTACCAGTAAATTGGACAAATCGGACTTTAGAACAATCTAAATTAACATACAGTGACATAGATAAACTTTCAATATCCAACATTCCCAATGGATCAAACAGATTCTGGACTCATTTAGTCATGGCTTACGCTTTTACCTTTTGGACATGTTATATTTTAAAAAGAGAGTATGCAATAATTGCAAAAATGCGGTTGCATTTTATTGCATCGGAACAACGCCGACCTGATCAGTTTACTGTGCTTGTGAGAAATGTGCCACCAGATCCCGATGAAACGGTCAATGAACTTGTGGAACATTTTTTTCTTGTTAATCATCCAGATCATTATTTATCTCATCAGGTTGTTTACAACGCGAATTCATTATCTAAGTTGGTAAATGAAAAGAAAACAAAGCAGAATTGGCTTGACTATTATCAACTGAAATATAACAGAAATAACCAATCAAAAAGACCATCAATGAAGACCGGATATCTTGGCTTGTGCGGGAAAAAGGTGGATGCAATTGATTATTATCAATCTGAGATTGATAAACTATCGAAAGAAATATGTAAAGAAAGGGAAAAGATTACAACAAGCTCCAAATATGTGATGCCAGCTGCATTTGTTTCATTTAAAACGCGTTGGGGGGCTGCTGTTTGTGCACAAACAGAACAATCAAGAAACCCAACAATCTGGTTAACCGAGTGGGCCCCAGAACCGCGCGATGTTTATTGGGATAATCTTGCAATACCATTTGTTTCACTCACAATTAGAAGACTTATAATTGCGGTTTCCTTTTTCTTTCTTACATTCTTCTTCATGATCCCAATAACATTTGTGCAATCACTCGCAAATATTGATGGGATTGTGAAAGCAGCTCCTTTTTTGCAGGGGATTTTGGATGTGGAGTTTGTAAAATCTTTTATTCAAGGTGTTCTTCCAGGAATTGCTTTGAAAATTTTCTTAATCATTCTACCATCAATCTTGATGATGATGTCTAAATTTGAAGGATTTACATCAATATCTGCATTAGAGAGAAGATCTGCAACAAGATATTATATTTTCCAATTTATTAATGTTTTTCTTGGAAGCATAATTACTGGGACTGCATTTCAACAGCTTAATAACTTCATCCACCAGTCTGCAAACACCATCCCAGTGACAATTGGAGCATCTATACCTATGAAAGCAACCTTCTTCATAACCTATATTATGGTAGATGGTTGGGCTGGAGTTGCAGGAGAAATATTAAGATTAAAACCATTAATATTTTACCATTTAAAAAATTTCTTTTTAGTAAAAACAGAAAAAGACAGAGAAGAAGCAATGAATCCTGGAAGTTTGTCTTTTAATACGGGCGAACCGCAAATACAGTTATACTTTTTACTTGGTCTTGTTTATGCTGTTGTCACACCGATTCTGCTTCCGTTTATAGTTGTGTTTTTCGGATTGGCTTACGTGGTATATCGTCATCAGATTATAAATGTGTATAATCAACAATACGAGAGTGCGGGTGCATTTTGGCCCGATGTTCACGGGCGGATCATAACCGCACTGATTGTTTCACAATTGTTGTTAATGGGTTTACTTAGTACAAAAGAAGCAGCTCAATCAACTCCATTGCTAATCGTACTTCCGGTTTTGACCGTTTGGTTTCATAGATTCTGCAAAGGTCGGTTTGAACCCGCTTTTGTTAGGTACCCTTTACAGGAGGCTATGATGAAAGACACACTAGAACGCGTACGGGAGCCATGTTTAAATGTTAAAGACTATTTACAAAACGCATACGCTCACCCGGTTTTTAATAACGAGAACAAATGGGACGGGAGTGATGATGGAGTAAGTGATGACGAGTGGCTTAAAGAACCCACATTGGTCGCAACAAAACGATCATCAAGAACAAATACACCGGCTAGAAGTCAACGGAGCGAGTCAACACGAACATTGTTGTGTGTTACAGACGAAAGATCTTGTCCTTGA | 2319 | 37.04 | MASSSEIGLAAAINILTAFAFLIAFAILRIQPLNDRVYFPKWYLKGLRNNPIQTGAFVQKFVNLDFRSYLRFLNWMPAALHMPEPELIDHAGLDSVVYLRIYLTGLKIFVPIACLAFTIMVPVNWTNRTLEQSKLTYSDIDKLSISNIPNGSNRFWTHLVMAYAFTFWTCYILKREYAIIAKMRLHFIASEQRRPDQFTVLVRNVPPDPDETVNELVEHFFLVNHPDHYLSHQVVYNANSLSKLVNEKKTKQNWLDYYQLKYNRNNQSKRPSMKTGYLGLCGKKVDAIDYYQSEIDKLSKEICKEREKITTSSKYVMPAAFVSFKTRWGAAVCAQTEQSRNPTIWLTEWAPEPRDVYWDNLAIPFVSLTIRRLIIAVSFFFLTFFFMIPITFVQSLANIDGIVKAAPFLQGILDVEFVKSFIQGVLPGIALKIFLIILPSILMMMSKFEGFTSISALERRSATRYYIFQFINVFLGSIITGTAFQQLNNFIHQSANTIPVTIGASIPMKATFFITYIMVDGWAGVAGEILRLKPLIFYHLKNFFLVKTEKDREEAMNPGSLSFNTGEPQIQLYFLLGLVYAVVTPILLPFIVVFFGLAYVVYRHQIINVYNQQYESAGAFWPDVHGRIITALIVSQLLLMGLLSTKEAAQSTPLLIVLPVLTVWFHRFCKGRFEPAFVRYPLQEAMMKDTLERVREPCLNVKDYLQNAYAHPVFNNENKWDGSDDGVSDDEWLKEPTLVATKRSSRTNTPARSQRSESTRTLLCVTDERSCP | 772 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre6g00242 | 772 | MobiDBLite | consensus disorder prediction | 740 | 760 | - | - | |
| Stre6g00242 | 772 | MobiDBLite | consensus disorder prediction | 738 | 760 | - | - | |
| Stre6g00242 | 772 | Pfam | Cytosolic domain of 10TM putative phosphate transporter | 197 | 360 | IPR027815 | - | |
| Stre6g00242 | 772 | Pfam | Late exocytosis, associated with Golgi transport | 9 | 176 | IPR032880 | - | |
| Stre6g00242 | 772 | PANTHER | PROBABLE MEMBRANE PROTEIN DUF221-RELATED | 7 | 723 | IPR045122 | GO:0005227(PANTHER)|GO:0005227(InterPro)|GO:0005886(PANTHER) | |
| Stre6g00242 | 772 | Pfam | Calcium-dependent channel, 7TM region, putative phosphate | 371 | 643 | IPR003864 | GO:0016020(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre6g00242 | K21989 | calcium permeable stress-gated cation channel |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 435537 | Stre6g00227 | Stre6g00242 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr10:21405873 | Stre6g00242 | Stre-Chr6:6494949 | dispersed | |
| Stre | Stre-Chr4:46842806 | Stre6g00242 | Stre-Chr6:6494949 | dispersed | |
| Stre | Stre-Chr6:6225954 | Stre6g00242 | Stre-Chr6:6494949 | dispersed | |
| Stre | Stre-Chr6:6417483 | Stre6g00242 | Stre-Chr6:6494949 | dispersed | |
| Stre | Stre-Chr6:6494949 | Stre6g03417 | Stre-Chr6:100216245 | dispersed | |
| Stre | Stre-Chr6:6431869 | Stre6g00242 | Stre-Chr6:6494949 | proximal |