AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00258 ATGATGCGATGCGATAGTAGTCGACATTTTTATCCGTTAACCAGTTTCCAGATCGGGGATTTGCAGTCTTATCTTTCGGATCTTGGACTTTTCTTGGCCCCTGATAGCAACGCGTTCTTTGTATTGGTGGATAATAGGCCATGGTTGGAAGCTCTTCCTTCACGGCCTGCACACTTATGGCAGTTAATGGTTACCAAGTCAAGGATGTCTCCTTTTGCAAACACAAGAGGGCGAAAGGGGAAGAAAGACACCACAGAGTTTATTGAAAAGAAAGTTAGATCTAAATCATCAAACCATTCCCAAAACTTGAAAAAATGGTTCTCAGTGGTAAATGCTGCAACACTATCAAGAAAAAGAGCTTTGTTACCTGTTAAGAAACTCAAGAATTCGTTGCTTGCAAATAGCAAATTGCATAGAACCTTGTTTGGGTTTATTGTGTTTCGAGTGGTGTGGAATGATGTTCGCGGTATCAATTACTTAAACGAGCTTCAGACTGATACATCTCTTGCTATTGAGGCTAAATACATGAAAAGATGGGAATTTGATAGCATAAATCAAGCAGTGAAATGCATAACTACATGGTTTCCAGGGACACCACATGAACGACGTCTTTTGGAAGATCATTTAGACTCCATGTTAGGAGATGTATTCCATGATGCTTCAGAAGAATTTACCGACACCTACAGTACAAATAATAGTGAACAAACCGCGAATGTTAGTGGGAGTGGGCCCGATGGATCTCCCGGGCCCAATGGAACTTTTGGGGCTGATGGATCTCCCTGCACTCCTCGTTGCAATATTAGTGAAACGATAGAAACTTCATCAAATCAAACAAGTATACTACATACACCACCTCCCAATGGACCCTATAAAAGAAGGAAATTAATGTCTCCAACTGGAATTAATATTAATACCAGTTTTTATACCGAAATAACTCACGGTGAAACCGTTAGCACACCAACAACCTCATCATACGCAAATGATCTTGATGAAACAACTAAACCCATGGAGTACAAAGATGTTTTACTTTTGTTCCGGTTCAATGATCACGACCTCCCGTTTGAGTTACAGAAAATAATATTATCCGATATACGATTACTCACATTATTAGAAGCCGGGCTTCCATCATGGGTAATTTTCTGCCAATCGTATCCCGTTTTTTGTCACATTTACCGCCCGTGGATGTGCCCGTTAGCTCGGGCCTTATATGTAGTAATCTCCATTGTTACGGTTGTTATCGGTTTCTACGATTTGTACAAAAACGTCCCCGTGCTTAAAGCAACCGCATCCCGTTTATGCGGGCCCCTTTTCGATTGGATAGAAACATGGGAAATGGTGTCGAGAATCAAGTACTTGGGTACCATGTTGTTTTTGCATAATTCTGAGAAGGCAGTTATGTGGTTTTTGATGATGACGCGTACCATTCGTTCGTTTGTTTCGGTTGTCACGCAGCCATTAGGGGGCCCGTTTTCGGATTTTATCGAGGTTGTTCTTCCCGTTTGGAATTTATTGATCCAATCGGGTCGTTATTTATGCTCCTTTGTTTGGGTTTTGATTGAAAGTTCGTGGGACGTATTGGAAAATGTTATCGAAGTCGTATTGGTTCCTCTGTGGTTCATCTCTTCAGTTATCTGGACTATTGTAATGACAGTTATGTACCCAATATTTTGGTGCCTTTGGGGAATACTCTATGCTCCAGTTAGTCTCATCCTCAGTCTATCCAATTTTGTTGGATTTGTTTATAACCAAATATACGATTCAGCTCGCGACATTTGGTTGTTCGCGAGTGGAATCTTCAAGTTAGCATCAAATGCTGAGTCAGCAGTCAACACGTACGAGGTTTCTATTTGGCGGTCTCTCTGGAATGATCTCTTCTCCCAGGTTTTTCGTGCTGTTCGGAGTATTTTAAACGGATTTGTTGCATTTTTCACAGCTTGCAATAGACATCGATTAAGCATATATAATCATTTACAGGAGTTCATTAGAACACTTAATCAACCAGCCCAAAGGCCAATGCCCTCAAATTCTACCCATAGATCACCGCGATCTAGAAATCAAACGCGAGGAGAAGATGGGGAAATAAAGGTGCCACTTAGGAGAAACTTGAAACAGAGTTGA 2118 41.12 MMRCDSSRHFYPLTSFQIGDLQSYLSDLGLFLAPDSNAFFVLVDNRPWLEALPSRPAHLWQLMVTKSRMSPFANTRGRKGKKDTTEFIEKKVRSKSSNHSQNLKKWFSVVNAATLSRKRALLPVKKLKNSLLANSKLHRTLFGFIVFRVVWNDVRGINYLNELQTDTSLAIEAKYMKRWEFDSINQAVKCITTWFPGTPHERRLLEDHLDSMLGDVFHDASEEFTDTYSTNNSEQTANVSGSGPDGSPGPNGTFGADGSPCTPRCNISETIETSSNQTSILHTPPPNGPYKRRKLMSPTGININTSFYTEITHGETVSTPTTSSYANDLDETTKPMEYKDVLLLFRFNDHDLPFELQKIILSDIRLLTLLEAGLPSWVIFCQSYPVFCHIYRPWMCPLARALYVVISIVTVVIGFYDLYKNVPVLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAVMWFLMMTRTIRSFVSVVTQPLGGPFSDFIEVVLPVWNLLIQSGRYLCSFVWVLIESSWDVLENVIEVVLVPLWFISSVIWTIVMTVMYPIFWCLWGILYAPVSLILSLSNFVGFVYNQIYDSARDIWLFASGIFKLASNAESAVNTYEVSIWRSLWNDLFSQVFRAVRSILNGFVAFFTACNRHRLSIYNHLQEFIRTLNQPAQRPMPSNSTHRSPRSRNQTRGEDGEIKVPLRRNLKQS 705
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00258 705 MobiDBLite consensus disorder prediction 683 705 - -
Stre6g00258 705 MobiDBLite consensus disorder prediction 667 705 - -
Stre6g00258 705 MobiDBLite consensus disorder prediction 227 258 - -
Stre6g00258 705 MobiDBLite consensus disorder prediction 667 682 - -
Stre6g00258 705 PANTHER OS05G0597400 PROTEIN 2 692 - -
Stre6g00258 705 MobiDBLite consensus disorder prediction 227 247 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00258 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
160101 Stre3g01201 Stre6g00258
160582 Stre6g00258 Stre9g02841
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr9:92899131 Stre6g00258 Stre-Chr6:7029286 transposed
Stre Stre-Chr3:15658732 Stre6g00258 Stre-Chr6:7029286 wgd