Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre6g00272 | ATGTCACCACTAATCACACATCTAATCCCAATACTTTTACTTCTAATTCATCCACACCCTACAGTCGCCGATCAATCATTCATCTCGGTGCTGATAACCCAAAACGGCCTCGATTTCGTTAAGAATCTGCTCGTAACGAAAGCAATTTCTAAAATCAATCCAACCCCACTGTCAAAAATCGATAGTGTTGTTAATATCCCTGTGATCGGTAAAGTGCATGTTGTTCTTTCAGATATCACAATTTACCGGTTTAATGTCGGATTATCGGAAGTTATACCACGTGTCACCAGTGTCACCATTGATGGATCAGATGTTACCTGTGATTTTAGTATGAAATGGCATTATTCTTATGGTTCTTCGCTTTTTCCGATTTCGATTGCGGATAGTGGAACTGCTGCTATTGAGGTTAATGGCATGAAGATGGTGGTGACATTGGGTTTGAATATTCTAGAAGGATCCATGAAACTTTGCAACATAAAATGTACATGTCATATACATGATATTTCCATAGATCTAGATGGAGGTTCATCTTGGCTCTATCAAGGGATTTTGGATGCATTCAAAGAAGAAATAGTGTCAGTTGTTGAATATTCAATAACCAAAATATTAAATACTGAAATTAAAAAACTTGGATTACTTCTACAAAGTCTTCCAAAACAAATTCCAGTTGATCATATAGCTTCATTAAATGTTACATTTGTTAATAACCCTTTATTAAGTGACACGTCATTAGGGTTTGAAATAAACGGGTTATTTATAGATAATAAAACCGATACACGATCATATGCAAACAATTTGCAGCCATCTGTTCGTTGTTCAAATCCTGCAAAAATGATTGGAATTGCGGTTGATGAAGCGGTTTTCAGATCTGCATTCGCCTTATACTACAATGCTATGTTTATGCATTGGATTGTGGATAAAATTCCTCAACAAAATCTTTTGAACACAGCAGGATGGAGATTTATTGTTCCTGAACTCTACAGAAAATTTCCAAATAATAATATGAATTTAAATATATCGTTATCTGATCCACCAGCTTTGCAGATATCATTGCAGAAAATTGATGCTACTATTTATGCGGATTTAATTATAAATGTTCTCGACAGACATGACACAATACCCGTTGCTTGTATCTCATTGGTAATTACTGGCATGAGTTCGGTTCAAATTACCGAAAATAACCTTGCTGCTCATTTGAAAATGGATGATTTTACCATGTCATTAAAATGGAGCAAAATTGGCACCTTGCATATGTTTCTAATTCAGCCGGTGATGTGGACACTAATTGAAACTGTTTTCATGCCATATGTAAATGCCCGTGTTGGGATTGGGTTCCCTTTGCCTTTAATTAACGGGTTTATGCTTGAAAATGCTGAGATAATAACCTCGGATTCTAGAATTACTGTCTGCAGTGATGTTACATACCGAGAACCGTTTGATGGTATCCAAGTGTACACTTCATAG | 1464 | 35.93 | MSPLITHLIPILLLLIHPHPTVADQSFISVLITQNGLDFVKNLLVTKAISKINPTPLSKIDSVVNIPVIGKVHVVLSDITIYRFNVGLSEVIPRVTSVTIDGSDVTCDFSMKWHYSYGSSLFPISIADSGTAAIEVNGMKMVVTLGLNILEGSMKLCNIKCTCHIHDISIDLDGGSSWLYQGILDAFKEEIVSVVEYSITKILNTEIKKLGLLLQSLPKQIPVDHIASLNVTFVNNPLLSDTSLGFEINGLFIDNKTDTRSYANNLQPSVRCSNPAKMIGIAVDEAVFRSAFALYYNAMFMHWIVDKIPQQNLLNTAGWRFIVPELYRKFPNNNMNLNISLSDPPALQISLQKIDATIYADLIINVLDRHDTIPVACISLVITGMSSVQITENNLAAHLKMDDFTMSLKWSKIGTLHMFLIQPVMWTLIETVFMPYVNARVGIGFPLPLINGFMLENAEIITSDSRITVCSDVTYREPFDGIQVYTS | 487 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre6g00272 | 487 | PANTHER | OS06G0309200 PROTEIN | 9 | 478 | IPR045897 | - | |
| Stre6g00272 | 487 | PIRSF | Lipid-binding-protein | 6 | 480 | IPR030675 | GO:0005615(InterPro)|GO:0008289(InterPro) | |
| Stre6g00272 | 487 | SUPERFAMILY | Bactericidal permeability-increasing protein, BPI | 244 | 475 | IPR017943 | GO:0008289(InterPro) | |
| Stre6g00272 | 487 | Pfam | LBP - BPI - CETP family, C-terminal domain | 273 | 475 | IPR001124 | GO:0008289(InterPro) | |
| Stre6g00272 | 487 | SUPERFAMILY | Bactericidal permeability-increasing protein, BPI | 29 | 240 | IPR017943 | GO:0008289(InterPro) | |
| Stre6g00272 | 487 | SMART | bpi2-2 | 273 | 471 | IPR001124 | GO:0008289(InterPro) | |
| Stre6g00272 | 487 | Gene3D | - | 29 | 462 | - | - | |
| Stre6g00272 | 487 | Gene3D | - | 35 | 215 | - | - | |
| Stre6g00272 | 487 | Pfam | LBP - BPI - CETP family, N-terminal domain | 36 | 207 | IPR017942 | GO:0008289(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre6g00272 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr5:96320640 | Stre6g00272 | Stre-Chr6:7525006 | dispersed |