AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre6g00288 | ATGGGTAAAATCTTGTGGGTGTTGTTTTGTGTTTTGGTATCGAATCTCGCCGTTTCATCGGCTCAAAGTTGCAACAATTACGCGTTTTCAAGCAACGAAATTTACGCCTCATGCGTCTCGTTACCAGTTTTGGACTCGCATCTGCACTGGAACTACAATCCCTCCAATCGCACCGTCGATCTGGCTTTCCGGCACACCGGATCGGAAACATCGCAGTGGGTTGCTTGGGCGCTTAACATCGGCGGTCAGGGTATGGTCGGAGCTCAGTCTTTGGTTGCGGTAACCAGTTCAAACGGGTCGGTTCAAGCTTACACTTCATCAGTTACCGGTTACCAGACCGGTTTGCAACCGAGTCCGTTGAGTTTCAATGTGCCGGCGATCAGGGCGGAGAGGATTAACAGTGTGGTGGTGATTTACGCGACGGTGGTGTTACCTAGTGGTGGGACGACGAGTTTTAATCAAGTTTGGCAGGTGGGTCCGGTTAGTAATGGAGCTCCGACTATTCATGCGTTGGATCCTGCTAATCGGAATTCCGTCGGAAGTGTGGATTTTACGACCGGTGAGGCTACTGCCGGAGGTGCTGTTGGTGGTTCACGAATGCGCCGGAGAAACAGACATGGAGTATTGAACGCGGTTAGTTGGGGAGTATTGATGCCAATGGGAGCAATGGCTGCAAGATACTTAAAAGTGTTTACTGTCGCTAATCCAGCTTGGTTTTACATCCACGTGGCAACCCAATCATCAGCGTATATCGTCGGTGTTGCCGGTTGGGCCACCGGACTCAAACTCGGAAGTGACTCCGCCGGAATCAGATACGATACTCACCGGAACATTGGAATCATCTTGTTTTCTTTCGCAACACTTCAGGTTTTTGCTTTGTTGTTGAGACCTAAACCAGAAAACAAATTCAGATTCTACTGGAACATCTACCATCATTCTCTTGGATACTCGATCATCATCTTGAGCATCATTAACGTCTACGAAGGACTCGATATCTTGGACCCCGAGAAGAAATGGAAGAACGCGTACACCGGGATATTAATATCGTTGGGTGTTATTACAGTTATTTTGGAAGCTTTAACATGGTTTATTGTTTTGAAGAGGAAGAATGAAGAGAAGAGGACACATGCAGGAGGAACTAATGGTGCTTATGAAGCCAATGGACATGTATAG | 1173 | 47.57 | MGKILWVLFCVLVSNLAVSSAQSCNNYAFSSNEIYASCVSLPVLDSHLHWNYNPSNRTVDLAFRHTGSETSQWVAWALNIGGQGMVGAQSLVAVTSSNGSVQAYTSSVTGYQTGLQPSPLSFNVPAIRAERINSVVVIYATVVLPSGGTTSFNQVWQVGPVSNGAPTIHALDPANRNSVGSVDFTTGEATAGGAVGGSRMRRRNRHGVLNAVSWGVLMPMGAMAARYLKVFTVANPAWFYIHVATQSSAYIVGVAGWATGLKLGSDSAGIRYDTHRNIGIILFSFATLQVFALLLRPKPENKFRFYWNIYHHSLGYSIIILSIINVYEGLDILDPEKKWKNAYTGILISLGVITVILEALTWFIVLKRKNEEKRTHAGGTNGAYEANGHV | 390 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre6g00288 | 390 | CDD | Cyt-b561-FRRS1-like | 177 | 359 | - | - | |
| Stre6g00288 | 390 | PIRSF | UCP037471 | 1 | 389 | IPR017214 | - | |
| Stre6g00288 | 390 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 24 | - | - | |
| Stre6g00288 | 390 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 7 | 372 | - | - | |
| Stre6g00288 | 390 | Pfam | Eukaryotic cytochrome b561 | 206 | 330 | IPR006593 | - | |
| Stre6g00288 | 390 | ProSiteProfiles | DOMON domain profile. | 44 | 159 | IPR005018 | - | |
| Stre6g00288 | 390 | Gene3D | - | 186 | 376 | - | - | |
| Stre6g00288 | 390 | ProSiteProfiles | Cytochrome b561 domain profile. | 170 | 366 | IPR006593 | - | |
| Stre6g00288 | 390 | FunFam | Cytochrome b561 and DOMON domain-containing protein | 184 | 374 | - | - | |
| Stre6g00288 | 390 | Pfam | Protein of unknown function (DUF568) | 85 | 184 | IPR045265 | - | |
| Stre6g00288 | 390 | CDD | DOMON-CIL1-like | 35 | 186 | IPR045265 | - | |
| Stre6g00288 | 390 | SMART | 561-7 | 205 | 330 | IPR006593 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre6g00288 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr1:119879175 | Stre6g00288 | Stre-Chr6:7871538 | dispersed | |
| Stre | Stre-Chr4:48985082 | Stre6g00288 | Stre-Chr6:7871538 | dispersed | |
| Stre | Stre-Chr6:7871538 | Stre9g02817 | Stre-Chr9:92218402 | dispersed | |
| Stre | Stre-Chr6:7832570 | Stre6g00288 | Stre-Chr6:7871538 | proximal | |
| Stre | Stre-Chr6:7871538 | Stre6g00289 | Stre-Chr6:7893060 | tandem |