Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stre6g00295	ATGGATTTTTCAGAATCTACAAAAATCGTATACGATAGAGTTCAAAAGATAGAACCCGAAAACGTCTCCAAGATAATCGGGTACCTTTTGTTACAAGATCATGGTGAACGTGAAATGATTAGATTAGCATTCGGACCCGATAATTTAATCCACAATTTAATCAATTTAGCAAAATCCCACCTCAAATTAACTTCAAACACAACTGTTGGTCAAGGTCAAGGTCAACCCATTTCACCTCGGGTCAACTCTATCTCCGACATCCCAATCGGCCCGATTCACTTCACACCATTCTCTCCTTCAACCCATCACTCACCATTAACGATCCAAGTTCCGACCCGTTGTTGTGATCCAAATGGTCAACCCGTTGACTTTGTTCCAATGGTTTATCCAGCTTCATATCCTCAAGATTACCATCTTCACAATCATCTTCATTTCATGTCATTAGAAGATGAAATCGAGCCCGTTAACAGTCCGGGTTTTTTGTATTCACCCGAACCGGCATTGGGCCCACGGGCCAATCGGAGATCACCGAGTTTACCCGAATTCCCGTTTAAAATCTGTCATTATTTCATTAAAGGGTTTTGTAGACATGGAAACAATTGTAGGTATTTACATCCTACTCCTGAAAGCTTTTCACAAATCTTTAACTCCAAATTGTGCGAGGACGATAACGTCTTTTCACCTATGTCTCTTGAGAAACTAGAGTTGGAACTCACTGAGTTACTGAAATCAAGAAGAGGGTTTCCTGTTTCGATCGCTTCTTTACCAATGATTTATTATGAAAAGTTCGGTAAAACGCTTCAAGCTGACGGGTATTTGACCGAAAGTCAAAGGCACGGGAAAGCAGGTTATAGTTTGACCAAACTTCTTGCGCGCCTTAAAAGCATTTGTCTCATCGATAGGCCACATGGGCAACACGCGGTTGTGCTGGCTGATGACATGGCAAAATACATGGATCATATCGGAGATAGAAATGAACACGGTGGAATTGTTGCGGGTTCTAGACAGATATATTTGACTTTTCCAGCTGAAAGTACATTTTCAGAGCTTGATGTTTATAATTATTTCAACAAATTCGGGCCAGTTCGTGACGTGAGAATTCCATGTCAGCAAAAGAGAATGTTTGGATTTGTAACTTTTGTGTTCGCGGATACCGTTAGACATATTTTAAACAAAGGAAATCCTCATTTTGTTAGTGGTGCACGCGTTTTGGTCAAACCGTATCGCGAAAAATGCAAATTTGATGATAGGAAACATAGTTACACATATCAACATCCTATGTACCAAGGTTCTCACTGTCTTGATACTGAACTCGGTCTGCAGTCAAGCAATGCTCACGAACAACAAATCGGCTTCCATTCGACTGAACGTTTTAACTATTTTCTTGATGTTTTAAACGACGGTGCAGTCAGTGAACATAAAATTAGGCAGATTAATACCGAATACAACGAGCAAGAAAGTAGTCAGGGATTGAATCTTCCAGACAGCCCATTTGCATCCGGATTAGGTGGCGAAATATCGACAGTTATTTAG	1533	40.51	MDFSESTKIVYDRVQKIEPENVSKIIGYLLLQDHGEREMIRLAFGPDNLIHNLINLAKSHLKLTSNTTVGQGQGQPISPRVNSISDIPIGPIHFTPFSPSTHHSPLTIQVPTRCCDPNGQPVDFVPMVYPASYPQDYHLHNHLHFMSLEDEIEPVNSPGFLYSPEPALGPRANRRSPSLPEFPFKICHYFIKGFCRHGNNCRYLHPTPESFSQIFNSKLCEDDNVFSPMSLEKLELELTELLKSRRGFPVSIASLPMIYYEKFGKTLQADGYLTESQRHGKAGYSLTKLLARLKSICLIDRPHGQHAVVLADDMAKYMDHIGDRNEHGGIVAGSRQIYLTFPAESTFSELDVYNYFNKFGPVRDVRIPCQQKRMFGFVTFVFADTVRHILNKGNPHFVSGARVLVKPYREKCKFDDRKHSYTYQHPMYQGSHCLDTELGLQSSNAHEQQIGFHSTERFNYFLDVLNDGAVSEHKIRQINTEYNEQESSQGLNLPDSPFASGLGGEISTVI	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stre6g00295	510	ProSiteProfiles	OST-type HTH domain profile.	230	313	IPR025605	-
	Stre6g00295	510	Gene3D	-	341	413	IPR012677	-
	Stre6g00295	510	SUPERFAMILY	CCCH zinc finger	184	206	IPR036855	GO:0046872(InterPro)
	Stre6g00295	510	SMART	c3hfinal6	183	207	IPR000571	GO:0046872(InterPro)
	Stre6g00295	510	ProSiteProfiles	Zinc finger C3H1-type profile.	181	208	IPR000571	GO:0046872(InterPro)
	Stre6g00295	510	Gene3D	-	182	236	-	-
	Stre6g00295	510	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	335	410	IPR000504	GO:0003723(InterPro)
	Stre6g00295	510	PANTHER	RNA-BINDING (RRM-RBD-RNP MOTIFS)	1	445	-	-
	Stre6g00295	510	FunFam	zinc finger CCCH domain-containing protein 53-like isoform X2	342	413	-	-
	Stre6g00295	510	SMART	rrm1-1	336	406	IPR000504	GO:0003723(InterPro)
	Stre6g00295	510	SUPERFAMILY	RNA-binding domain, RBD	347	425	IPR035979	GO:0003676(InterPro)
	Stre6g00295	510	Pfam	RNA recognition motif	348	394	IPR000504	GO:0003723(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stre6g00295	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	160092	Stre3g01188	Stre6g00295

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Stre	Stre-Chr5:40847145	Stre6g00295	Stre-Chr6:7974836	transposed
	Stre	Stre-Chr3:15549849	Stre6g00295	Stre-Chr6:7974836	wgd
	Stre	Stre-Chr6:7974836	Stre9g01645	Stre-Chr9:29121546	wgd