AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00307 ATGTCAACTTCCGGCGACATCAACTACAATCTCGAGTACCGGTCGCGAAAAGACGACGGTTGGTACAGCTGCGGCGTCGTTCCAGAACACGGAAATCGACTCCGCGTTAAGTTTAAGGACTTCGTGCAGAGCTACAACGATGAGGTTTTCTCCGTCTCCGATTTCTCGACGGAGGATGAAATCGGAGAATTTTGTCGGAGATTCCGTCTGGAATCTGTGCCGATTGACGATAATGAGTGCTCGAGAGTTACTGAAGGGTTCAAGGTCTGTGCTGCGTATACAGGCGATAAACAACTGCGATACTTTGACGCCATTGTTGACGCTGTTTGTTACAAAGAACACGCGCCCGAAAAGTGTTTATGCACTTATTTACTTTTATGGCAGCATGGTCCAGAAGAGGGAAATATAACAGCAGCAAATCTTGATGATATATACCTCATTAATTCTGATTTTGTTGATCCAACAGTAGACAACTTCACAAAACTTGTGAAGGAAAAAGTCAAACGGGTCTCCTTTGAATCTTCTCTTATTTCCAAGAATCCACTTTTGTCCCGAAAAACAAGCTCAAATGAAACTATCACTAAATCACAGGAGTTTGGCAGTGTTGGATACAGTTCTCGCGTTGGATTCTCAGCAGGGAGTAAAAGATTATATCCTGAATTAAGAGATCAGGACAGAGATTTGGGTGGTGTGAAAGAAACTAACAGTCATCATTATATTATATTGGAAAACTTAGAAAAAGATTTATCTCCATTTTTAATGATGGATTTTATCCAAGAACATACTCTAATCACAACACAAGCATACATTTTTCCAAGTTTATTAGCAGAAACATACGCACGAGGAGCAATTACGGTCGATAGCAGAACAAAACTTAAGAGGATATATGAATTTATAAAAAATCCAAATCACTTTATTGTATCTTCCACTGGAAGACCTTGGATAATAGCTGAAGATAAACTTAGAACAGGAACATTTAACACAAACCTGCTCACTATACAACCTAAGTATGAGTTGTTTGCGTTCAATTACACGTCTCAAAAACACTCCCAACACACTCAAATCTAA 1068 39.61 MSTSGDINYNLEYRSRKDDGWYSCGVVPEHGNRLRVKFKDFVQSYNDEVFSVSDFSTEDEIGEFCRRFRLESVPIDDNECSRVTEGFKVCAAYTGDKQLRYFDAIVDAVCYKEHAPEKCLCTYLLLWQHGPEEGNITAANLDDIYLINSDFVDPTVDNFTKLVKEKVKRVSFESSLISKNPLLSRKTSSNETITKSQEFGSVGYSSRVGFSAGSKRLYPELRDQDRDLGGVKETNSHHYIILENLEKDLSPFLMMDFIQEHTLITTQAYIFPSLLAETYARGAITVDSRTKLKRIYEFIKNPNHFIVSSTGRPWIIAEDKLRTGTFNTNLLTIQPKYELFAFNYTSQKHSQHTQI 355
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00307 355 PANTHER SAWADEE PROTEIN 8 338 - -
Stre6g00307 355 Gene3D - 75 143 - -
Stre6g00307 355 Pfam SAWADEE domain 9 144 IPR032001 GO:0003682(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00307 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr6:8255998 Stre9g01634 Stre-Chr9:28950716 wgd