Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre6g00312 | ATGAGTGGGGCTAGGGTTTCCATTCCAAACAATGTAAGGAAGACGATCCAAAACATCAAGGAGATCACAGGTAATCACAGTGAAGATGAGATATATGCAATGCTTAAAGATTGTTCCATGGATCCGAACGAGACCGCTCAAAAGCTCCTTTTTCAAGATCCATTTCATGAAGTTAAAAGGAAGCGTGACCGCAAAAAAGAGAATTTGAATAAAGAAACTACAGAGTCAAGATTGAAACCTGGGATGCAGGGAAGGGGGAATAGAGGTGGCAGGTTGAACTACTCATCTCGTCGCATTTCTAATGACGTAGGTGGCGGCAGGAAACCACTTTCTGCAAAGGAAAATGGCACGACTAAATTTGGAGATGTTGGTCAAAATCAGTCAACGCTTCACGGTCAGAAGAATAAAGAAACATTTGTGACTAAAAGTTCTTCGAGTGTTGTACCTGATGGGATTGAACATTCGTTGGTGGGAAGTGATGAGAAGAAATCTGAAGTGGTCCCCACTGCTGATGATAGTGTACGTGGGTCCCTCATTTCGAGCACTAATGACACATCAGCTTCTAAGACACCATTACCTTCACCAGGGGTATATTTGTCCGATAAAGATCCTATTCTGATGCCTTCACAAGATTCACGGTTCCCTGTTGGTACAATCAAACGTGAAATTGGGAGTCAACAAACTCCAGTTGACCAAATTCACGAGACCCCCCTTGTGATTGAATCAACTGCATCTGGTTCTGAGGTTGGAAATTCTTCCATGCAAGGGAAGTTAACATCTTCTCATGTCACATTTTCCACTTCGAGACCTTCTTCAAACTATAATAATAAGATGCAACAAGCAATTGGGCCTCAAAAAGTTGGTCCAAATATGGAATGGAAACCAAAACCAACAAATCCAATTCTTACTCAAAGAATCGAGTTAACCGATCCAATTGAGGTGCACGTGGTTCAACCTGAAAGTCAAACTCCAGACGCGTTTGCAGACCAAAATCTTGATTCAAATAAAACAATGCACGCGCTAGTGAAGAAGCTAGAGGAATCACATATTTCAGTTGATCAACATGTTATTCTTCCTAATCATCTTCATGTTCCTGAACCTGAAAAACTCGGGTTTTACTTTGGGAGTTTTGATACCGGTTTTAGTTTCAATGCAACCTCCTCAAATGGGCCTGGGCCTGGGCCTGGGATTGGGCCTGTGAGTGACAAGAGTTCTGAGGCTTCTGAGGTGGTTGATGAAAGTATAGATGAGCAGCACAGAAATCAAAACAATGATTTGGCAAGTGGTGATGATGAAGATCATCCATCATCATCATCCAATAACATACCCGAGAATTTATCAGCCGAAGGTGATGTGTCATCAAATTCGGGTCTCGATTACCATGAAACCAAACACGAGACTTCACTTCCAACCACAAGCCATCAATACCCGATTCTTCAAACATCTCCTAACTTCAATTTTGGGTTTATTCCACCAATGATTGGGACCCACATCGCATCGTTTGAAACCAACGAGTCTCATAGTCATGATGGTCCTCAAATCCCAAATTTTGTTCAGCAACAATTTGACCCAGCAAGCTATTATGCTCAATTTTATCGTTCTGGTGCTGATGTGGATGGCCGGATATCACCCTTTAATTCAACCGGGCTTCCAACCAAATTTAATGGAAATATTCCCGTTTTACCCCCACGGCCTTCTCATTCTTCTCAAGAGGTTGGGAACTCACTAATGTTATCTGTTACTGGTTCAACACCAATAACCACCACACAACCCGGTGGATTCATGCAAACCTCCATACCCATAACCCAGCAACCCGTACCCGTTTTCAGACAACCAACCGGTGTTCATTTACCACATTACCCTCCAAATTACATCCCATATGCTCCGTTTTTCTCCCCATTTTATGTTCCTCCACAAGCTCTTCATCAATTTTTAAGTAATAATAATACATTCCCACAACAACCTCAAGCTGGTAACATGTACCCGGGCCCACCAGTTGCAAGCCCTAAATACCCACCTCCACAATACAAAACGGGTCAAAATAACCCGGTTAATATTGGAATGCCCGGAAACTATGGACCGTATGGCTTAAACCCTCGTGGCTATAATCCTGGTTCGGTTGGTATAGCTGGCAATTCGACCCCCGATGATGACATCAGCGGGTCCCAGTTTAAGGAAAGTAATGTTTACGTTACTGGACAACAGAGTGAAGGATCGGGCGTATGGATGGCTTCACCAGGTCGAGACATATCGGGTTTGCAAGCTAATTCTTTCTACAACATTCCTCAAAGTGGTCAAGTTGCGTATACGCCACCACAAGTCAACCATGGGACTTTTGCTAGTCTTTACCACCACCCGGGTCAACCCGTAACCACCGGTGCGGTTCACCCACTTCTCCAACAGTCTCAATCACCGGCTGGACCCACACCACAGATCAATTGGCCTAATAACTACTGA | 2457 | 43.67 | MSGARVSIPNNVRKTIQNIKEITGNHSEDEIYAMLKDCSMDPNETAQKLLFQDPFHEVKRKRDRKKENLNKETTESRLKPGMQGRGNRGGRLNYSSRRISNDVGGGRKPLSAKENGTTKFGDVGQNQSTLHGQKNKETFVTKSSSSVVPDGIEHSLVGSDEKKSEVVPTADDSVRGSLISSTNDTSASKTPLPSPGVYLSDKDPILMPSQDSRFPVGTIKREIGSQQTPVDQIHETPLVIESTASGSEVGNSSMQGKLTSSHVTFSTSRPSSNYNNKMQQAIGPQKVGPNMEWKPKPTNPILTQRIELTDPIEVHVVQPESQTPDAFADQNLDSNKTMHALVKKLEESHISVDQHVILPNHLHVPEPEKLGFYFGSFDTGFSFNATSSNGPGPGPGIGPVSDKSSEASEVVDESIDEQHRNQNNDLASGDDEDHPSSSSNNIPENLSAEGDVSSNSGLDYHETKHETSLPTTSHQYPILQTSPNFNFGFIPPMIGTHIASFETNESHSHDGPQIPNFVQQQFDPASYYAQFYRSGADVDGRISPFNSTGLPTKFNGNIPVLPPRPSHSSQEVGNSLMLSVTGSTPITTTQPGGFMQTSIPITQQPVPVFRQPTGVHLPHYPPNYIPYAPFFSPFYVPPQALHQFLSNNNTFPQQPQAGNMYPGPPVASPKYPPPQYKTGQNNPVNIGMPGNYGPYGLNPRGYNPGSVGIAGNSTPDDDISGSQFKESNVYVTGQQSEGSGVWMASPGRDISGLQANSFYNIPQSGQVAYTPPQVNHGTFASLYHHPGQPVTTGAVHPLLQQSQSPAGPTPQINWPNNY | 818 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre6g00312 | 818 | PANTHER | FLOCCULATION PROTEIN (DUF1296) | 1 | 813 | IPR044277 | GO:0051082(PANTHER) | |
| Stre6g00312 | 818 | MobiDBLite | consensus disorder prediction | 174 | 193 | - | - | |
| Stre6g00312 | 818 | MobiDBLite | consensus disorder prediction | 55 | 74 | - | - | |
| Stre6g00312 | 818 | MobiDBLite | consensus disorder prediction | 118 | 150 | - | - | |
| Stre6g00312 | 818 | MobiDBLite | consensus disorder prediction | 406 | 432 | - | - | |
| Stre6g00312 | 818 | MobiDBLite | consensus disorder prediction | 433 | 457 | - | - | |
| Stre6g00312 | 818 | Coils | Coil | 55 | 75 | - | - | |
| Stre6g00312 | 818 | MobiDBLite | consensus disorder prediction | 155 | 169 | - | - | |
| Stre6g00312 | 818 | MobiDBLite | consensus disorder prediction | 385 | 476 | - | - | |
| Stre6g00312 | 818 | SUPERFAMILY | UBA-like | 8 | 70 | IPR009060 | GO:0005515(InterPro) | |
| Stre6g00312 | 818 | MobiDBLite | consensus disorder prediction | 55 | 194 | - | - | |
| Stre6g00312 | 818 | Pfam | GBF-interacting protein 1 N-terminal | 8 | 67 | IPR009719 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre6g00312 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 159635 | Stre2g03703 | Stre6g00312 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr4:112110629 | Stre6g00312 | Stre-Chr6:8315003 | dispersed | |
| Stre | Stre-Chr4:112272913 | Stre6g00312 | Stre-Chr6:8315003 | dispersed | |
| Stre | Stre-Chr6:8315003 | Stre6g02909 | Stre-Chr6:92160662 | dispersed | |
| Stre | Stre-Chr2:139020384 | Stre6g00312 | Stre-Chr6:8315003 | wgd |