AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00326 ATGCATAAAACGGCACAAGCGTGGTTCACCGGAGGTCCGAGACTGAAGAACAGCGATCTGACAAATCAACAACCTTCTCTTCTTGCTGATTGGAACGCTTATGCCGCATCTTCACAATCTGATCAAGATTTAGATTCTTCCGGTCTCGGTTTTGATCTTGAAGCCGCAGTTCGATCAGCCAATGATAAGGTTTCCGGCACTTTTAACGTAGTTTCAAAGGGGGTGAGGGACATACCTGGAAATTTGCATTCTGCAACAAGTAATGTTCCAACTGGAAAATCTTTTATGACATTTGGTATACTTCTTGCGGTTGGTGTGTTTCTTGTGTTCATTGCTGTCACTGTGTTTCTACCGGTCATGGTGGTTGTGCCTCAGAAATTTGCGATATGTTTCACTATCGGTTGTGCTCTCATAATTGCTTCATTTTTTGCTCTCAAAGGATATAGAGCTCAATTTACACATATGACATCTAAAGAGAGGCTCCCTATTACACTGGGTTTTATTGGGAGCATGGTGGGGACCATTTATGTTTCAATGGTGCTTCACAGTTATGTTCTTTCTGTATTATTCTCTATGTTACAGGTCATATCTTTGTCATATTATGCAATCTCCTACTTTCCCGGAGGATCCGCTGGTGTGAAATTCTTCACCGCTGCTATCACTTCTTCGATTCTTAGATGTTTTGGGAGGTGA 693 41.99 MHKTAQAWFTGGPRLKNSDLTNQQPSLLADWNAYAASSQSDQDLDSSGLGFDLEAAVRSANDKVSGTFNVVSKGVRDIPGNLHSATSNVPTGKSFMTFGILLAVGVFLVFIAVTVFLPVMVVVPQKFAICFTIGCALIIASFFALKGYRAQFTHMTSKERLPITLGFIGSMVGTIYVSMVLHSYVLSVLFSMLQVISLSYYAISYFPGGSAGVKFFTAAITSSILRCFGR 230
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00326 230 PANTHER UNCHARACTERIZED 1 220 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
Stre6g00326 230 Pfam Got1-Sft2-like family 96 207 IPR007305 GO:0016192(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00326 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr11:109024141 Stre6g00326 Stre-Chr6:8906365 dispersed