Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre6g00372 | ATGGCCGACAAAATTGAAAAGACCGGTGATGTGGCAACCTCTGCACCCGGACCATGCCCGGAAGAAGATGGAAACTCCGGCATCCAGACGGCGGAGACACTCCTGAGACTGTTGCCGGTGGTGCTTTGTGTGGCGGCGTTAGTCGTTATGGTTAAGGATTCTGAGACGAATGAATATGGATCTTTATCATACTCTAATATCACTGCTTTCAGGTTTTTGGTGCATGCTAATGGTGTATTGGCGGGTTACTCGCTACTTTCAGCCGCTTTCATGGCAATACCTCGGCCTATGACCATGTCTCGAGCCTGGACCTTCTTTCTACTCGACCAGGTTTCAACATACTTGATACTGGCGGCGGGTGCAGTGGCAACAGAGGTGGCGTTCTTGACATACAATGGTGACGTGGCGGTTACTTGGAGTGAAGCATGTGGGACCTACGGCCACTTTTGTAGACGAGCAACAACATCTATCATCATCACCTTTGTGGTGATTATTTGCTACATTTTACTATCGTTAATCTCGTCGTATAGGCTCTTCAGCAAGTATGATGCACCAGTCGGGTATCGTAACAAGGGAATCGAGATCATTGACTTCGGGAATTGA | 603 | 48.42 | MADKIEKTGDVATSAPGPCPEEDGNSGIQTAETLLRLLPVVLCVAALVVMVKDSETNEYGSLSYSNITAFRFLVHANGVLAGYSLLSAAFMAIPRPMTMSRAWTFFLLDQVSTYLILAAGAVATEVAFLTYNGDVAVTWSEACGTYGHFCRRATTSIIITFVVIICYILLSLISSYRLFSKYDAPVGYRNKGIEIIDFGN | 200 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre6g00372 | 200 | PANTHER | CASP-LIKE PROTEIN 4A4 | 29 | 180 | - | - | |
| Stre6g00372 | 200 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Stre6g00372 | 200 | NCBIfam | plant integral membrane protein TIGR01569 | 35 | 176 | IPR006459 | - | |
| Stre6g00372 | 200 | Pfam | Casparian strip membrane protein domain | 26 | 166 | IPR006702 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre6g00372 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr2:177171319 | Stre6g00372 | Stre-Chr6:9952989 | transposed | |
| Stre | Stre-Chr6:9952989 | Stre9g01621 | Stre-Chr9:28579652 | wgd |