AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00373 ATGAGGGAAGAAGGATTCAGCTCATCTGGCGACCCGTTACTTTTCCCCAATTCTCCTCCGCCTACCGCTGCTGCCAGCTCTGCTGGAGCATCATCACCGGTTGTTGCCACCAATGCTGGCAGTACGGATTGGTTGGGTCATGGTCAAGGGTCCAAAGCGGGTTCACAGTCTCGAATCAGTTCACAACCCGTTTGGATTTCATTGAGTACAAGTGCTGGTGGTTCGGCTCTTGGTTCATCTAAATCTTCATGTAGACCATGGGAAAGAGGCGATCTTCTAAGACGGTTATCTACTTTCAGTCCTGCAAATTGGTTTGGAAAACCTAAGACTGCAAGCTCACTTTCTTGTGCTAGAAAAGGTTGGGTGAATATAGATGTTGATGAAATTCAGTGCGAGTCTTGTGGGGAAACTTTGAAATATAATGCACCAGATTCATGGGCATGTACAGAAGGTGAAAATGGTGAAGAATTTGCTAGCCAGCTGGACGAAGGACATAATGCCACCTGTCCTTGGAGAGGAAATAGCTGTGCTGAAAGCTTGGTTCAATTCCCACCTACCCCACCGTCTGCTCTGATTGGCGGTTATAAGGACCGTTGTGATGGATTAATTCAGTTTCCTTATTTACCCGTTGTCGCTAATTCGGCTATTGATCAAATGAAGCTTTCTAGAGGTCTAGAAATTGAACGGTTTTTGGCACAATCGTCTGCTTATCCTGCAGACATTATGTCTGATTCGGAAATAAGCATATATTTACGTGCCCAAAAGTTGATAAGCTTATGTGGATGGGAGCCAAGGTGGCTTCCAAATGTTCAAGATTGTGAAGAACATTCCGCTCAATCAGCAAGAAACGGTGGTTCATTCAGCCCGATAAAAAATCCCGACCCGCTACAAGATCGAGCCCCGAACAAGAAGCCTGTCTCTAATTCCACCAGAAAAGGTTATCGGGTTGGGTCAAAATTCGAATTTGGATCTCTCTTGTTGGATTGTAGCTTATGTGGCGCCACCGTGAGAATCTTGGACTTTATTCGTGTCAATCTTCCCGCTCGTTTAGCTCCTAACAACATCGATGTTCCCGAAACGAGTAAAAAGATGGCGGTTACTCGCGGAGTGAGTGCCGCTAGCGGTGTTAGCGGGTGGGTGGCTGCTGACGAGGCGGAAGATGAGCAGACAGAGGATGTTGATGAAGCTGCAATGTCAAATGTTAGGATGGATTTAAATCTCACAATGGGAAGCGGGTTTTCTACGGGTCACGGGCATAAAAGACCAATATCTGATTTATATCAAGACGGGAATTTAGGTCGGGATTTAGTCATCGGGCAGCCAGCTGGCAGTGAGGTCGGTGACCGTGCACAATCGTATGAATCACGTGGGCCCACTACTTTCAAACGGTTTGTTGATGAAGGCGGGTCAACCGTTGATAGACCAAACGGGTTGATTCCTCAAGCAGACAGTGTTGAAGGCGTTGTTATTGATCGCGATGGTGATGAAATCAACGACAGCAAGATGTCGTTGAGTCATCAGGGCCCGTCTAAACGGGCTTGCGAGTCATCATCAGGTGCGGGCCCGAGTCGGACTTTGTATTTTGATATGGGCCGGGCAGGCCCAATAAGCCAAGGTCATGAACATGCAGCACGTGCTTCTTCGGTTATTGCAATGGACACAATGTGTCATAGTGAAGATAATGATTCGATGGAAAGTGTCGAAAATCATCCGGGTTTTATCGATGAGGTTAACTACCCGTACCCGTCCACGTCAGCGGTCAACCCTGACCCGAACGAAACGTCAGATATGAACCATAGCATCCAGGCTCAACAAAGCACGTGTCCACCTGGCGCTTGGGGTGAAATAGGTGTTAGCAGCACAAATGATGATGAAGTACTGAATACCGAAACCGCCACCGGTTACAGACGGGAAAACCCTAGTTTGGCGGTTAGTGGCGGTAGTGTTGGAATGGGTGCGAGTCATGAAGCTGAGATTCACGGTTTGATTCATAGGACCGAAAGTGTTGTCGGTGATATGGAACCGGTTACTGGTGTGACTGAGAATCAAGGTCAAACGGGTGAATTTGTTCCGGAAGAAATGCAACAGGAATATTCCGGAAGGGGGGATAGCGGGTCAAAGGTTGTTGGTTCGGTCAAAGGTGAATCGGTTGAGAGTGGTGAAAAGACTAGTGATTTGAATCTTTTACCACATGAACAAAACTCACATCCGTCACTTTCTTGCAATGCGGTTGTGTATTCGGGTCTTGAAGTTTCAAAAGATGAAGTGATGCAGGCCCGCAGGTCGTCTCCTAATGATGAATGTGGGTACCCAAATTATCCGCCTGCAAACGGATTAGGGCCTCCAAATGAAGAAAGCAAATTTGAAGAACCAGTTGAGTTTGATCCAATTAAACATCATAATTTTTTCTGCCCGTGGGTAAATGGTAATGTTGCTGCAGCTGGAGTTAATAATAATAATAATAATAATAATGGTGGTAGTTCAAGTTCAAGTTCCAGTTCTTTAGCTCTTTGTGGGTGGCAGTTAACTCTAGATGCTTTAGATGGCTTTCAAGGTCTCGAACAAAATCAAACCGTTGAATCTGAATCTGCTGCATCTCTGTACAAGGATGATCATCAAGGTTCTGGTAAAAAACTAATTGCACGCCATTCGTTCAACAGAAGTCGTGGCCAAAATTGA 2679 46.1 MREEGFSSSGDPLLFPNSPPPTAAASSAGASSPVVATNAGSTDWLGHGQGSKAGSQSRISSQPVWISLSTSAGGSALGSSKSSCRPWERGDLLRRLSTFSPANWFGKPKTASSLSCARKGWVNIDVDEIQCESCGETLKYNAPDSWACTEGENGEEFASQLDEGHNATCPWRGNSCAESLVQFPPTPPSALIGGYKDRCDGLIQFPYLPVVANSAIDQMKLSRGLEIERFLAQSSAYPADIMSDSEISIYLRAQKLISLCGWEPRWLPNVQDCEEHSAQSARNGGSFSPIKNPDPLQDRAPNKKPVSNSTRKGYRVGSKFEFGSLLLDCSLCGATVRILDFIRVNLPARLAPNNIDVPETSKKMAVTRGVSAASGVSGWVAADEAEDEQTEDVDEAAMSNVRMDLNLTMGSGFSTGHGHKRPISDLYQDGNLGRDLVIGQPAGSEVGDRAQSYESRGPTTFKRFVDEGGSTVDRPNGLIPQADSVEGVVIDRDGDEINDSKMSLSHQGPSKRACESSSGAGPSRTLYFDMGRAGPISQGHEHAARASSVIAMDTMCHSEDNDSMESVENHPGFIDEVNYPYPSTSAVNPDPNETSDMNHSIQAQQSTCPPGAWGEIGVSSTNDDEVLNTETATGYRRENPSLAVSGGSVGMGASHEAEIHGLIHRTESVVGDMEPVTGVTENQGQTGEFVPEEMQQEYSGRGDSGSKVVGSVKGESVESGEKTSDLNLLPHEQNSHPSLSCNAVVYSGLEVSKDEVMQARRSSPNDECGYPNYPPANGLGPPNEESKFEEPVEFDPIKHHNFFCPWVNGNVAAAGVNNNNNNNNGGSSSSSSSSLALCGWQLTLDALDGFQGLEQNQTVESESAASLYKDDHQGSGKKLIARHSFNRSRGQN 892
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00373 892 MobiDBLite consensus disorder prediction 862 892 - -
Stre6g00373 892 MobiDBLite consensus disorder prediction 696 723 - -
Stre6g00373 892 MobiDBLite consensus disorder prediction 1 58 - -
Stre6g00373 892 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 890 - GO:0005634(PANTHER)
Stre6g00373 892 MobiDBLite consensus disorder prediction 20 58 - -
Stre6g00373 892 MobiDBLite consensus disorder prediction 501 521 - -
Stre6g00373 892 MobiDBLite consensus disorder prediction 761 788 - -
Stre6g00373 892 MobiDBLite consensus disorder prediction 278 311 - -
Stre6g00373 892 MobiDBLite consensus disorder prediction 460 479 - -
Stre6g00373 892 Pfam C3HC zinc finger-like 86 206 IPR012935 GO:0008270(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00373 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
159642 Stre2g03715 Stre6g00373
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr4:103233507 Stre6g00373 Stre-Chr6:9959136 transposed
Stre Stre-Chr2:139173787 Stre6g00373 Stre-Chr6:9959136 wgd