Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stre6g00380	ATGGCTTCTTCTTCGTGTTCTTCTATTTCGAATCCTGTTAGTAGTAATTCTAAAAGCAGGTTTCTATCGTCTTCAAAAGATGTGTTCGGTTCGAATTCATCGTCAATTTCTTTCGGTAAAAGAGCTAATTCTAAGAAGAATTCACATAAATCGATTGTTTGTGCACTTCAAACACCTTCAATTCTTCAAATTCCGAAACAGAGTCCTATAAAAACCTCAACCAGAACAATTGAATTACCATCATCATCTTCTTCGTCTCCAAAAGTCCAGCAAAATTGGAACTTATTACAGAAACTTGCAGCAATGGCATTGGACGCCATTGAAGACGGAATAATAGCTCGAGAAAAGCAACACCCTTTACCCAAAACAGCTGACCCAAAAGTCCAAATCGCCGGAAATTTTTCACCGGTACCGGAACAGCCTGTGCGACATGCTTTACCAGTCGCCGGAAAAATCCCTGATCATATTCAAGGAGTTTACTTACGAAACGGAGCTAACCCGTTATTCGAACCCACCTCCGGTCACCATCTGTTCGACGGAGACGGTATGATTTACGCGGTTAAGTTTGAAAACGGGTCCGCTAGCTACGCGTGCCGGTTCACCGAAACACAGAGACTTGTTCAAGAATGTGCGATCGGAAAACCAGTGTTCCCGAAAGCGATCGGAGAACTTCATGGACATTCCGGCATCGCAAAGCTTTTAATGTTTTACGCTCGTGGTTTGTGTGGTTTGATTGATCACACTCAAGGAATCGGAGTGGCGAACGCCGGTCTGGTTTATTTCAACAACCGGTTGTTAGCTATGTCGGAAGACGATTTGCCGTATCACGTGCGAGTCACGCCCTCCGGTGACTTGAAAACCGCCGGCCGGTACAATTTCGACGGCCAATTGGAGTCCACCATGATCGCTCACCCGAAGCTTGATCCAGTTTCCGGCGAGTTGTTCGCATTGAGCTATGATGTTATTCAAAAACCATACCTGAAATACTTCCGATTCTCACCGGACGGGAAGAAATCAAAAGACGTAGCGATCGATTTGGGTAAACCCACCATGGTTCATGATTTCGCGATCACTGAGAATTTCGTGGTGGTACCGGATCATCAGGTGGTTTTCAAGATGTCGGAGATGATCACCGGCGGGTCGCCGGTGGTGTACGACAAAGAAAAGGTGTCAAGGTTTGGTGTACTTGACAAATATGCAGAAAACGGGTCGGGTATTAAATGGGTCGAGGTTCCGGATTGTTTCTGTTTTCATCTCTGGAACGCATGGGAGGAACCCGAATCCGACGAGGTTGTTGTAATCGGGTCCTGCATGACTCCGGCTGACTCGATTTTCAACGAATGTAACGAGGAATTAAAAAGCGTGTTGTCGGAAATCCGTTTAAATTTAAAAACCGGGAAATCGACTCGCCGGAGCATAATCTCGCCGGAAAATGACGTCAATTTGGAAGCCGGAATGGTGAACAAAAACCTCCTCGGCCGGAAATCAAGATACGCGTATCTTGCAATCGCCGAACCATGGCCGAAAGTTTCCGGATTCGCAAAAGTCGATCTGTTCACCGGCGAGACCAAGAAGTTCATCTACGGCGATCAGAAGTACGGCGGTGAGCCTCTGTTTCTTCCCAAAAACACCAATTCCGCCGGAGAAGACGACGGTCACATCTTGGCCTTCGTTCACGACGAGAAAACATGGAAATCAGAGCTGCAAATCGTGAATGCGATGACAATGGAATTAGAAGCCACCGTGAAGCTGCCGTCAAGGGTTCCATATGGGTTTCATGGAACATTCATAAACGCCGACGATTTGGCAACTCAGGCGTGA	1821	46.68	MASSSCSSISNPVSSNSKSRFLSSSKDVFGSNSSSISFGKRANSKKNSHKSIVCALQTPSILQIPKQSPIKTSTRTIELPSSSSSSPKVQQNWNLLQKLAAMALDAIEDGIIAREKQHPLPKTADPKVQIAGNFSPVPEQPVRHALPVAGKIPDHIQGVYLRNGANPLFEPTSGHHLFDGDGMIYAVKFENGSASYACRFTETQRLVQECAIGKPVFPKAIGELHGHSGIAKLLMFYARGLCGLIDHTQGIGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGDLKTAGRYNFDGQLESTMIAHPKLDPVSGELFALSYDVIQKPYLKYFRFSPDGKKSKDVAIDLGKPTMVHDFAITENFVVVPDHQVVFKMSEMITGGSPVVYDKEKVSRFGVLDKYAENGSGIKWVEVPDCFCFHLWNAWEEPESDEVVVIGSCMTPADSIFNECNEELKSVLSEIRLNLKTGKSTRRSIISPENDVNLEAGMVNKNLLGRKSRYAYLAIAEPWPKVSGFAKVDLFTGETKKFIYGDQKYGGEPLFLPKNTNSAGEDDGHILAFVHDEKTWKSELQIVNAMTMELEATVKLPSRVPYGFHGTFINADDLATQA	606

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stre6g00380	606	MobiDBLite	consensus disorder prediction	1	42	-	-
	Stre6g00380	606	PANTHER	BETA-CAROTENE DIOXYGENASE	116	598	IPR004294	GO:0009570(PANTHER)\|GO:0010436(PANTHER)\|GO:0016121(PANTHER)\|GO:0016702(InterPro)
	Stre6g00380	606	Pfam	Retinal pigment epithelial membrane protein	139	597	IPR004294	GO:0016702(InterPro)
	Stre6g00380	606	MobiDBLite	consensus disorder prediction	67	87	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stre6g00380	K09840	9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	159644	Stre2g03718	Stre6g00380

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Stre	Stre-Chr6:10129204	Stre9g02765	Stre-Chr9:90608078	dispersed
	Stre	Stre-Chr5:93899589	Stre6g00380	Stre-Chr6:10129204	transposed
	Stre	Stre-Chr6:90546286	Stre6g00380	Stre-Chr6:10129204	transposed
	Stre	Stre-Chr2:139275278	Stre6g00380	Stre-Chr6:10129204	wgd
	Stre	Stre-Chr6:10129204	Stre9g01614	Stre-Chr9:28449046	wgd