AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00385 ATGGGGAATAAGTTGGGTAGAAGAAGACAGTTAGTTGATGAAAAGTATACAAAGCCACAAGGATTGTATCAACACAAAGATGTAGATCACAAAAAGCTTCGGAAACTTATACTTGATTCGAAACTTGCTCCATGTTATCCTGGAGACGATGACTGCAGTTGTGATCTTGAAGAATGCCCAATTTGTTTCTTGTATTATCCAAGCTTAAATAGATCTAGATGTTGCACGAAAGGCATTTGTACGGAGTGTTTTTTGCAGATGAAGACGCCTAATTCTACACGTCCAACACAATGTCCTTTTTGTAAAACTTTAAACTATGCTGTCGAGTATAGAGGTGTAAAAACTAAAGAGGAAAAGGGGCAAGAACAAATTGAAGAACAAAGAGTTATAGAAGCAAAAATAAGAATGAGACAACAAGAAATTCAAGATGAAGAGGAACGAATGTTAAAAAAACAAGAAACGAGATCTTCAAGCAGGGTTTTTGAATCAAATGATGCTGAATATTTCTCCAGAGGAGCAGCATCTTCTGAAGGTGAGGAAGTTGTTTCTGTTCCAACAATTAGACATCCTCCACCCTACAGGGAAAACAGAGATGATGAGTTTGATCTTGATCCTGAAAACATAATGCTCATGGAAGCTATCTGGTTGTCTTATCAGGAGGATAACAAGCACAAATACAATAACACTAATTACGGTGATGCAACACAATTAGCAAAATACGCGACAGAAGTTCGTCTTCTAGCATCAATGGCCCCACAAGCGGAATATTCCGCTTCATCCTCGTCACCTTCTGGTGGACTTGCATGCGCGATAGCCGCCCTTGCTGAACGCCAGCAAACGCGAGGCGAATCGTCATCAAGTAACTACGAATCATCAAGTAATTACGAATCATCAACTAATTACAACAATTATAGTGGGAATTTATCAACATACAACGCGCATCCAAATCATAGCCAAACAGGGTTATTATCACTCGATAACCACCTGCAAATGAATCAAGATAATTTAGAAGAATTTGGTGAAACTGGATTTGGGTATGATGGTAGTTTGAGGACAGTAGATGATAATGATAATGATAATGATGATGATGTAAGCAGAGGGCATTTTGGTCAATTTGATGACGCGGAAAGTGGCGGTGGGAATATTGTTCCCGAGAGCTTTGAAGAACAGATGATGTTAGCGATGGCGGTTTCATTGGCGGAGGCTCGAGCTAGGGCTAATAGTACACCGGAGGTTGCGTGGATTTAG 1248 39.9 MGNKLGRRRQLVDEKYTKPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGVKTKEEKGQEQIEEQRVIEAKIRMRQQEIQDEEERMLKKQETRSSSRVFESNDAEYFSRGAASSEGEEVVSVPTIRHPPPYRENRDDEFDLDPENIMLMEAIWLSYQEDNKHKYNNTNYGDATQLAKYATEVRLLASMAPQAEYSASSSSPSGGLACAIAALAERQQTRGESSSSNYESSSNYESSTNYNNYSGNLSTYNAHPNHSQTGLLSLDNHLQMNQDNLEEFGETGFGYDGSLRTVDDNDNDNDDDVSRGHFGQFDDAESGGGNIVPESFEEQMMLAMAVSLAEARARANSTPEVAWI 415
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00385 415 ProSiteProfiles Zinc finger RING-type profile. 59 102 IPR001841 -
Stre6g00385 415 MobiDBLite consensus disorder prediction 180 200 - -
Stre6g00385 415 PANTHER PROTEIN SIP5 1 312 IPR039301 GO:0005737(PANTHER)
Stre6g00385 415 MobiDBLite consensus disorder prediction 279 301 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00385 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr6:10283784 Stre9g01609 Stre-Chr9:28320543 wgd