Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre6g00394 | ATGTCATCTTTTTCGTTACTTCCACTTACCTCCACATTCACTAGCCTTCCATCCACCAATACCCAACGAGCCATCAAGACTCGAACCAATCAGACCCAAGGGTTCAGAGTCTCGTGCAACAATGCAGTAGACAACTATAATGACAAGAAACTCATACTCCCTGGAGACCAAAAGCTTGTACTGCCCAATGTAGACCGGAGAAACCTGCTCGTCGGGCTCGGTGGGCTCTACACAGCTACCAACCTCACTTCCATGCCATCCGCAATGGCGGATCCAATCGTAGCTCCAGATATCACGGCCTTATGCAAGGACGCTGGTGCTGGCGTCAACGGCAAAGAAAAAGCTATCCGGTCACTAAAATGCTGTCCTCCGGCCCTCGGAAAAAAGATCAAACCGTTCGTGTTCCCGAAGGATAAGAAGGTGAGGATGCGATGGCCAGCACATGCCGGAACCAAAGAGCAGATTGAAAAATACCGAGCCGCGATTCAAGCCATGATAGACCTCAAGGATGAACAACCGCACAGCTTCGTGAGTCAAGCTAAGATCCATTGTGGGTACTGTAACGGTGGTTACACTCAAGCCGATAGCGGTAAAGGTTTTCCAGATAAAGATATCCAGATCCATAACTCGTGGTTGTTTTTCCCGTTTCACCGTTGGTACCTCTATTTCTACGAGAGAATCCTCGGGAAATTGATCAACGATCCGGATTTCGCGTTACCGTACTGGAAGTGGGATGAACCCGCCGGTATGCCGATCCCGGCGATGTTTCTACCAAAAACAATTAATGGCAAACGGAACCCTTTGTATGATGTTTACCGAGATCCGGATCATGTTAAAGACAGAATCGTTGATCTTGATTTTGACGGTAATGATAACGAAATCCCGGCTAAACAGCAGACGGAATGCAATCTAAGCACTGTGTACCGTGATTTGGTCCGAAATGGTGGTGATACGTTGAGTTTCTTCGGTGGTAAGTACATTGCGGGTGATTCACCGGACATGGGTAACTTCTACTCCGCAGGGTATGACCCTTCGTTCTACATTCATCACTCGAACGTGGACCGGATGTGGAAGCTATGGAAGGAACTGCGCCTTCCGGGTCACGTTGAGCTAACCGATAAAGACTGGCTCAACGCGTCTTTTGTGTTCTATGACGAGAACGAAGATCTTGTGCGTGTGTATGTTAGGGACTCGGTTAACCTTGACAAGCTTAAGTACAACTATATTGAGAACTCGAAGGAAGTGTTCCCGTGGCGCAAGAGTCGGCCCCAGAGGCGTAGAAAGAGCCAGCAAGTGGCAAAGACTGCTGAGGTGAAAACCGTGGACCAAATTAAGTTCCCGGTTCGTCTGAACAAGATCTTGAAGGTTCGTGTGAAGCGGCCCGCGGTTAACCGGAGTGATGAAGAGAAGGAGAAAGCGAATGAAGTGTTGTTGATCAAGAGGATTGAGCATGATGGTGGGAAGTTTGTCAAGTTTGATGTGTTTGTGAATGACAAACTCAAAGATGGTGAAGTGACTACTCCTTGTGACCCAGAGTACGCGGGTGGGTTCGCTCAAATCCCGCATAGCAGTAGGAAGAACATGATTATGACGAGTTCAGCTAGGTTTGGGCTAACAGAGTTGTTGGAGGACATGAACACGGAGGGTGATGAGTATGCTACCGTGACATTGGTGCCGAGGACCGGGACCGATGATCTCAACGTTGGCAGCATCCTGATCGAGTTGGTTCCAGTTTCTAAAGTCTAA | 1746 | 48.51 | MSSFSLLPLTSTFTSLPSTNTQRAIKTRTNQTQGFRVSCNNAVDNYNDKKLILPGDQKLVLPNVDRRNLLVGLGGLYTATNLTSMPSAMADPIVAPDITALCKDAGAGVNGKEKAIRSLKCCPPALGKKIKPFVFPKDKKVRMRWPAHAGTKEQIEKYRAAIQAMIDLKDEQPHSFVSQAKIHCGYCNGGYTQADSGKGFPDKDIQIHNSWLFFPFHRWYLYFYERILGKLINDPDFALPYWKWDEPAGMPIPAMFLPKTINGKRNPLYDVYRDPDHVKDRIVDLDFDGNDNEIPAKQQTECNLSTVYRDLVRNGGDTLSFFGGKYIAGDSPDMGNFYSAGYDPSFYIHHSNVDRMWKLWKELRLPGHVELTDKDWLNASFVFYDENEDLVRVYVRDSVNLDKLKYNYIENSKEVFPWRKSRPQRRRKSQQVAKTAEVKTVDQIKFPVRLNKILKVRVKRPAVNRSDEEKEKANEVLLIKRIEHDGGKFVKFDVFVNDKLKDGEVTTPCDPEYAGGFAQIPHSSRKNMIMTSSARFGLTELLEDMNTEGDEYATVTLVPRTGTDDLNVGSILIELVPVSKV | 581 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre6g00394 | 581 | ProSitePatterns | Tyrosinase and hemocyanins CuB-binding region signature. | 343 | 354 | IPR002227 | GO:0016491(InterPro) | |
| Stre6g00394 | 581 | PRINTS | Tyrosinase copper-binding domain signature | 342 | 360 | IPR002227 | GO:0016491(InterPro) | |
| Stre6g00394 | 581 | PRINTS | Tyrosinase copper-binding domain signature | 208 | 225 | IPR002227 | GO:0016491(InterPro) | |
| Stre6g00394 | 581 | PRINTS | Tyrosinase copper-binding domain signature | 239 | 244 | IPR002227 | GO:0016491(InterPro) | |
| Stre6g00394 | 581 | Pfam | Polyphenol oxidase middle domain | 370 | 424 | IPR022739 | GO:0004097(InterPro) | |
| Stre6g00394 | 581 | Pfam | Protein of unknown function (DUF-B2219) | 446 | 575 | IPR022740 | GO:0004097(InterPro) | |
| Stre6g00394 | 581 | Pfam | Common central domain of tyrosinase | 174 | 362 | IPR002227 | GO:0016491(InterPro) | |
| Stre6g00394 | 581 | SUPERFAMILY | Di-copper centre-containing domain | 119 | 408 | IPR008922 | - | |
| Stre6g00394 | 581 | Gene3D | - | 331 | 414 | IPR008922 | - | |
| Stre6g00394 | 581 | Gene3D | - | 91 | 330 | IPR008922 | - | |
| Stre6g00394 | 581 | PANTHER | TYROSINASE FAMILY MEMBER | 64 | 543 | IPR050316 | - | |
| Stre6g00394 | 581 | ProSitePatterns | Tyrosinase CuA-binding region signature. | 208 | 225 | IPR002227 | GO:0016491(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre6g00394 | K00422 | polyphenol oxidase [EC:1.10.3.1] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr6:10580416 | Stre9g01608 | Stre-Chr9:28297817 | dispersed | |
| Stre | Stre-Chr6:10580416 | Stre6g00397 | Stre-Chr6:10622715 | proximal | |
| Stre | Stre-Chr6:10538622 | Stre6g00394 | Stre-Chr6:10580416 | tandem |