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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00438 ATGGGTTGCTTTGGATCGTCGTTAAATAAGCGAGACAGTAAAATGGGCTGCTTTGGATCGTCGCTAAATAAGCAAGATTTAACTACGAAAAAAATAAGAAAGCCAAAACCATGGGAGTTCCCACGACCCGTTACATGGAGTCAGCTGGTTCAGATGCGTGATGAGTTTTGGGATTCGGCTCCTCATCATGGTGGCAAGAAAGAAATTTGGGATGCAATACATGCAGCAGCTGAAGCTGATATAGAGCTTGCTCAAGTAATCTTGGACAGTGCAGGGGTCATTGTTCATAAACCTGATATGACAGTTTGTTATGATGAAACAGGTACCAAGTATAAAATACCAAGGTATGTGTTGAGTGAGCCAACAAACTTGATACGACTAAGTTGA 387 41.86 MGCFGSSLNKRDSKMGCFGSSLNKQDLTTKKIRKPKPWEFPRPVTWSQLVQMRDEFWDSAPHHGGKKEIWDAIHAAAEADIELAQVILDSAGVIVHKPDMTVCYDETGTKYKIPRYVLSEPTNLIRLS 128
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00438 128 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 125 IPR039869 -
Stre6g00438 128 Gene3D - 45 118 IPR038169 -
Stre6g00438 128 Pfam Ubiquitin-binding domain 29 126 IPR032752 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00438 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
435542 Stre6g00438 Stre9g01576
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr6:11696110 Stre9g01576 Stre-Chr9:27668188 wgd