AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00454 ATGCGGTGGGTTTGGGAAGCTAACCGTGGCAACCCGGTTCGCGAAAACGCCACACTCACGTTTGGGACTGACGGGAACTTGGTCCTAGCTGATGCCGGTCGGGTCGTCTCGCAAACCAACACCGCGAACAAGGGTGTGGTCGGGTTTCAAGTTCTTCCAACAGGTAACATGGTTCTACACGACGGTAAAGGTAACTTCTTATGGCAAAGCTTTGATTCCCCAACCGACACTCTTTTGGTCGGTCAGACACTCCGAGCCGGTGGTCCGAGTAAGCTCGTGAGCCGGTTTTCGGTGGCGAACAACATTGATGGACCGTATAGTTTGGTTATGGAGCCCAAAGGGTTAACCTTGTATTACAAAAGTCCGAACTCACCTCGACCGATGGTATATTGGACGTCAACCGAATGGTTCACAATTGACAAAGGTAGTTTAACCAACCTAACTCTTACATCGAACCCTGACACCGATGAGGGGTTTCTTTATTATTTAACATTCGATTATTTCACCACAAACCCAACATCGTCATCGAACCGCAACATGGCATTTACGCGATACAACAACACGTTATCGTATCTTCGGTTGGGTATAGACGGGAACCTTAGGTTCTACACGTATAACCCAAACGTGCAAGGGGTCGCGTGGGAGTTGGTTTACACGTTTCTTGATCGCGACTCGATTGAAGGCGAGTGCCAGTTGCCGGAACGATGTGGGAAGTTCGGGTTAATTATTTATTATTACAAGTTAGAAGGTGTTGATCATTTTATGATAATGTACACGAGGGGTGATTCAACCAAACAAAGCGATTGTGAGAGCAAATGCACGAAAGATTGTAAGTGTATGGGTTATTTCTATCATACGGATAGTTCGAGGTGTTGGATTGCTTACGATTTGAAAACGTTAACACGAGTTGGGAACTCAACACATTTGGCGTATATTAAAACTCCGAAGTAG 951 46.27 MRWVWEANRGNPVRENATLTFGTDGNLVLADAGRVVSQTNTANKGVVGFQVLPTGNMVLHDGKGNFLWQSFDSPTDTLLVGQTLRAGGPSKLVSRFSVANNIDGPYSLVMEPKGLTLYYKSPNSPRPMVYWTSTEWFTIDKGSLTNLTLTSNPDTDEGFLYYLTFDYFTTNPTSSSNRNMAFTRYNNTLSYLRLGIDGNLRFYTYNPNVQGVAWELVYTFLDRDSIEGECQLPERCGKFGLIIYYYKLEGVDHFMIMYTRGDSTKQSDCESKCTKDCKCMGYFYHTDSSRCWIAYDLKTLTRVGNSTHLAYIKTPK 316
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00454 316 Pfam D-mannose binding lectin 4 85 IPR001480 -
Stre6g00454 316 ProSiteProfiles Bulb-type lectin domain profile. 1 72 IPR001480 -
Stre6g00454 316 Gene3D - 7 131 IPR036426 -
Stre6g00454 316 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 3 315 IPR051343 -
Stre6g00454 316 SMART blect-4 1 74 IPR001480 -
Stre6g00454 316 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 136 IPR036426 -
Stre6g00454 316 CDD PAN-AP-plant 263 315 - -
Stre6g00454 316 CDD B-lectin 1 74 IPR001480 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00454 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr6:12347974 Stre8g03220 Stre-Chr8:102338227 dispersed
Stre Stre-Chr6:12331577 Stre6g00454 Stre-Chr6:12347974 tandem