Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre6g00454 | ATGCGGTGGGTTTGGGAAGCTAACCGTGGCAACCCGGTTCGCGAAAACGCCACACTCACGTTTGGGACTGACGGGAACTTGGTCCTAGCTGATGCCGGTCGGGTCGTCTCGCAAACCAACACCGCGAACAAGGGTGTGGTCGGGTTTCAAGTTCTTCCAACAGGTAACATGGTTCTACACGACGGTAAAGGTAACTTCTTATGGCAAAGCTTTGATTCCCCAACCGACACTCTTTTGGTCGGTCAGACACTCCGAGCCGGTGGTCCGAGTAAGCTCGTGAGCCGGTTTTCGGTGGCGAACAACATTGATGGACCGTATAGTTTGGTTATGGAGCCCAAAGGGTTAACCTTGTATTACAAAAGTCCGAACTCACCTCGACCGATGGTATATTGGACGTCAACCGAATGGTTCACAATTGACAAAGGTAGTTTAACCAACCTAACTCTTACATCGAACCCTGACACCGATGAGGGGTTTCTTTATTATTTAACATTCGATTATTTCACCACAAACCCAACATCGTCATCGAACCGCAACATGGCATTTACGCGATACAACAACACGTTATCGTATCTTCGGTTGGGTATAGACGGGAACCTTAGGTTCTACACGTATAACCCAAACGTGCAAGGGGTCGCGTGGGAGTTGGTTTACACGTTTCTTGATCGCGACTCGATTGAAGGCGAGTGCCAGTTGCCGGAACGATGTGGGAAGTTCGGGTTAATTATTTATTATTACAAGTTAGAAGGTGTTGATCATTTTATGATAATGTACACGAGGGGTGATTCAACCAAACAAAGCGATTGTGAGAGCAAATGCACGAAAGATTGTAAGTGTATGGGTTATTTCTATCATACGGATAGTTCGAGGTGTTGGATTGCTTACGATTTGAAAACGTTAACACGAGTTGGGAACTCAACACATTTGGCGTATATTAAAACTCCGAAGTAG | 951 | 46.27 | MRWVWEANRGNPVRENATLTFGTDGNLVLADAGRVVSQTNTANKGVVGFQVLPTGNMVLHDGKGNFLWQSFDSPTDTLLVGQTLRAGGPSKLVSRFSVANNIDGPYSLVMEPKGLTLYYKSPNSPRPMVYWTSTEWFTIDKGSLTNLTLTSNPDTDEGFLYYLTFDYFTTNPTSSSNRNMAFTRYNNTLSYLRLGIDGNLRFYTYNPNVQGVAWELVYTFLDRDSIEGECQLPERCGKFGLIIYYYKLEGVDHFMIMYTRGDSTKQSDCESKCTKDCKCMGYFYHTDSSRCWIAYDLKTLTRVGNSTHLAYIKTPK | 316 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre6g00454 | 316 | Pfam | D-mannose binding lectin | 4 | 85 | IPR001480 | - | |
| Stre6g00454 | 316 | ProSiteProfiles | Bulb-type lectin domain profile. | 1 | 72 | IPR001480 | - | |
| Stre6g00454 | 316 | Gene3D | - | 7 | 131 | IPR036426 | - | |
| Stre6g00454 | 316 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 3 | 315 | IPR051343 | - | |
| Stre6g00454 | 316 | SMART | blect-4 | 1 | 74 | IPR001480 | - | |
| Stre6g00454 | 316 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 2 | 136 | IPR036426 | - | |
| Stre6g00454 | 316 | CDD | PAN-AP-plant | 263 | 315 | - | - | |
| Stre6g00454 | 316 | CDD | B-lectin | 1 | 74 | IPR001480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre6g00454 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr6:12347974 | Stre8g03220 | Stre-Chr8:102338227 | dispersed | |
| Stre | Stre-Chr6:12331577 | Stre6g00454 | Stre-Chr6:12347974 | tandem |