AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre6g00456 | ATGGCGGCTTCTGCTGAAAGAGAAAAATTCATCTACGTCGCCAAGCTCGCTGAACAAGCTGAACGATATGACGAGATGGTGGATGCCATGAAGAAAGTAGCAAAGTTGGATATCGAATTAACAGTTGAAGAGAGAAATTTACTCTCAGTTGGATACAAGAATGTGGTGGGTTCACGAAGGGCATCATGGAGGATATTATCGTCCATTCAGCAAAAAGAGGAGTCAAGAGGCAATGAAGTTAATGTAAAGCGGATTAAGGAATACATGCAGAAGGTTGAATCAGAGTTGTCTGACATTTGCACTGATATTATGACCGTCATTGATGAGCATCTGATTCCATCTTCATCTCCTGGAGAATCGACTGTTTTCTACTACAAGATGAAAGGAGACTATTATAGGTATCTTGCAGAGTTCAAGTCTGGTAATGACAAAAAAGAAGCAGCTGATCAGTCACTGAAGGCTTATCAATCGGCTTCTACTGCTGCAGAGGATTTATCTCCTACGCATCCGATCCGATTGGGTTTGGCTTTAAACTTCTCTGTTTTCTATTATGAGATCATGAACTCTCCCGAAAGAGCCTGTCACCTGGCAAAACAAGCTTTTGATGAAGCGATCTCAGAACTTGACTCTTTGAGCGAGGAATCATACAAAGATAGCACATTAATCATGCAGCTTTTAAGAGACAACCTCACTTTGTGGACTTCTGACATTCCAGAGGATGGAGAAGACCAAAAGATGGAGATCACCAAATCCGGTGCAGAAGAAGCAGAGTAA | 774 | 41.86 | MAASAEREKFIYVAKLAEQAERYDEMVDAMKKVAKLDIELTVEERNLLSVGYKNVVGSRRASWRILSSIQQKEESRGNEVNVKRIKEYMQKVESELSDICTDIMTVIDEHLIPSSSPGESTVFYYKMKGDYYRYLAEFKSGNDKKEAADQSLKAYQSASTAAEDLSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKMEITKSGAEEAE | 257 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre6g00456 | 257 | SUPERFAMILY | 14-3-3 protein | 6 | 236 | IPR036815 | - | |
| Stre6g00456 | 257 | MobiDBLite | consensus disorder prediction | 236 | 257 | - | - | |
| Stre6g00456 | 257 | Gene3D | - | 1 | 249 | IPR036815 | - | |
| Stre6g00456 | 257 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
| Stre6g00456 | 257 | Coils | Coil | 194 | 214 | - | - | |
| Stre6g00456 | 257 | SMART | 1433-4 | 7 | 247 | IPR023410 | - | |
| Stre6g00456 | 257 | Pfam | 14-3-3 protein | 14 | 234 | IPR023410 | - | |
| Stre6g00456 | 257 | ProSitePatterns | 14-3-3 proteins signature 2. | 216 | 235 | IPR023409 | - | |
| Stre6g00456 | 257 | FunFam | 14-3-3 protein epsilon | 2 | 247 | - | - | |
| Stre6g00456 | 257 | PANTHER | 14-3-3 PROTEIN | 6 | 239 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
| Stre6g00456 | 257 | MobiDBLite | consensus disorder prediction | 238 | 257 | - | - | |
| Stre6g00456 | 257 | PIRSF | 14-3-3 | 1 | 246 | IPR000308 | - | |
| Stre6g00456 | 257 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
| Stre6g00456 | 257 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
| Stre6g00456 | 257 | PRINTS | 14-3-3 protein zeta signature | 207 | 236 | IPR000308 | - | |
| Stre6g00456 | 257 | PRINTS | 14-3-3 protein zeta signature | 180 | 206 | IPR000308 | - | |
| Stre6g00456 | 257 | PRINTS | 14-3-3 protein zeta signature | 153 | 179 | IPR000308 | - | |
| Stre6g00456 | 257 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
| Stre6g00456 | 257 | Coils | Coil | 13 | 33 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre6g00456 | K06630 | 14-3-3 protein epsilon |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 159663 | Stre2g03763 | Stre6g00456 | |
| 435545 | Stre6g00456 | Stre9g01570 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Stre | Stre-Chr6:12553545 | Stre7g00225 | Stre-Chr7:6942312 | dispersed | |
| Stre | Stre-Chr1:33165540 | Stre6g00456 | Stre-Chr6:12553545 | wgd | |
| Stre | Stre-Chr2:140243505 | Stre6g00456 | Stre-Chr6:12553545 | wgd | |
| Stre | Stre-Chr3:14610214 | Stre6g00456 | Stre-Chr6:12553545 | wgd | |
| Stre | Stre-Chr6:12553545 | Stre9g01570 | Stre-Chr9:27560712 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Stre9g01570 | ACH,WGDA | 1 | 263 | 14-3-3 family | AT2G42590 | 77.186 | 1.13e-149 | 416.0 | |
| Stre1g01126 | ACH,WGDA | 2 | 256 | 14-3-3 family | AT1G78300 | 87.109 | 2.08e-163 | 451.0 | |
| Stre1g03143 | WGDA | 9 | 264 | 14-3-3 family | AT1G35160 | 85.938 | 4.22e-166 | 458.0 | |
| Stre1g01479 | . | 3 | 257 | 14-3-3 family | AT3G02520 | 88.235 | 6.39e-167 | 460.0 | |
| Stre2g00522 | . | 6 | 263 | 14-3-3 family | AT2G42590 | 75.676 | 4.48e-144 | 402.0 | |
| Stre2g04313 | ACH,WGDA | 1 | 263 | 14-3-3 family | AT1G35160 | 83.712 | 2.52e-161 | 446.0 | |
| Stre2g05786 | WGDA | 7 | 266 | 14-3-3 family | AT1G35160 | 85.057 | 1.27e-164 | 454.0 | |
| Stre2g04720 | . | 3 | 254 | 14-3-3 family | AT3G02520 | 89.683 | 1.68e-167 | 462.0 | |
| Stre2g03763 | ACH,WGDA | 1 | 244 | 14-3-3 family | AT2G42590 | 81.557 | 1.93e-151 | 421.0 | |
| Stre8g01432 | . | 4 | 247 | 14-3-3 family | AT5G10450 | 85.246 | 3.72e-158 | 437.0 | |
| Stre8g01469 | WGDA | 2 | 259 | 14-3-3 family | AT1G78300 | 84.109 | 7.65e-162 | 447.0 | |
| Stre8g01431 | . | 4 | 247 | 14-3-3 family | AT5G10450 | 85.246 | 3.72e-158 | 437.0 | |
| Stre3g01118 | ACH,WGDA | 1 | 263 | 14-3-3 family | AT2G42590 | 76.046 | 7.42e-149 | 414.0 | |
| Stre5g02475 | WGDA | 7 | 266 | 14-3-3 family | AT1G35160 | 84.291 | 9.43e-166 | 457.0 | |
| Stre5g00298 | . | 6 | 256 | 14-3-3 family | AT1G26480 | 86.905 | 6.29e-163 | 451.0 | |
| Stre7g00225 | . | 6 | 264 | 14-3-3 family | AT1G26480 | 81.467 | 1.49e-158 | 439.0 | |
| Stre7g01850 | WGDA | 2 | 249 | 14-3-3 family | AT1G78300 | 87.55 | 4.26e-161 | 445.0 | |
| Stre7g00751 | WGDA | 1 | 247 | 14-3-3 family | AT5G65430 | 85.83 | 4.78e-161 | 444.0 | |
| Stre6g00456 | ACH,WGDA | 1 | 263 | 14-3-3 family | AT2G42590 | 76.426 | 3.87e-150 | 417.0 |