AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00478 ATGGCTACCGATTCAGCTGAGCTTGAAAATGTTGCAGAATCAAAAGTTCATGTTTTCTCATCATCATCGGAGTTGCTTGAAAAGTTGAATCAGAAGTGGAAATCAGTTGAGAAACTGCCATATCCTGCAATGTATTCCAGTGTTTATGGTGGAATCATTCTTGATCCAGCAATGATGGTCATCCCTATAGATGATCATATGGCGCATCGAGGACATGGTGTTTTCGACACCGCTATCATCCTTGATGGGTACCTGTATGAGCTAGATGGTCATCTTGATCGAATCCTACTATCGGCATCACGAGCCAAACTTTCACCACCATTTCCCAAATCGACCCTTCGATCGATTCTGATCCAACTGACATCAATATCAAAATGCAAAAAAGGAACTTTAAGATACTGGTTAAGCGCAGGACCAGGGGATTTCTTGCTTACACCTTCAAGATCCTCTACGTCAGCGTTCTACGCGATCGTGATCGACGAAGATTTCTCGCAATGTAAAGAAGGCGTAAAGGTGATAACTTCCACAATCCCCATGAAAGAACCTTTGTTTGCAACAAGCAAGAATGTGAATTACCTCCCAAATGTTCTTTCAAAGCTAGAAGCAGAAGAAAAAGGCGCATTTGCATCAATTTGGGTTGATGATGACGGGTATGTTGCGGAGGGTCCGAATGTAAATGTGGGTTTCGTGACCTGTGAAAAAGAGCTCATTTTGCCGTTTTTTGACAAGATTTTAAGCGGGTGTACCGCGAAACGGCTTCTTGAGTTGGCTCCAAAGTTGGTTGAAAATGGGAGTTTGAAGAGTGTGAAAATTGGGAATTTGACAGTTGAAGAAGCTAAACAATCTGCTGAAATGATGTATATTGGTAGCACACTTCCGGTTTTGCCAATTATTGAATGGGATGAAAAGCCGATTGGAGACGGAAAAGTTGGGGAATTGACAATGGCGTTATCGGATCTTGTTTGGGAAGATATGGTGGCGGGTCCGGAGACACATAGGATAAAGATTGATTACGCGTAA 1020 42.55 MATDSAELENVAESKVHVFSSSSELLEKLNQKWKSVEKLPYPAMYSSVYGGIILDPAMMVIPIDDHMAHRGHGVFDTAIILDGYLYELDGHLDRILLSASRAKLSPPFPKSTLRSILIQLTSISKCKKGTLRYWLSAGPGDFLLTPSRSSTSAFYAIVIDEDFSQCKEGVKVITSTIPMKEPLFATSKNVNYLPNVLSKLEAEEKGAFASIWVDDDGYVAEGPNVNVGFVTCEKELILPFFDKILSGCTAKRLLELAPKLVENGSLKSVKIGNLTVEEAKQSAEMMYIGSTLPVLPIIEWDEKPIGDGKVGELTMALSDLVWEDMVAGPETHRIKIDYA 339
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00478 339 FunFam D-amino-acid transaminase, chloroplastic 21 159 - -
Stre6g00478 339 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 49 326 IPR036038 GO:0003824(InterPro)
Stre6g00478 339 Gene3D - 11 159 IPR043131 -
Stre6g00478 339 FunFam D-alanine aminotransferase 161 328 - -
Stre6g00478 339 Pfam Amino-transferase class IV 73 300 IPR001544 GO:0003824(InterPro)
Stre6g00478 339 PANTHER AMINO-ACID AMINOTRANSFERASE 33 330 IPR050571 GO:0019752(PANTHER)
Stre6g00478 339 Gene3D - 161 333 IPR043132 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00478 K18482 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr10:55909714 Stre6g00478 Stre-Chr6:13205320 dispersed