AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00486 ATGTCGGTCTCGTTTCGTAGTCATTTCTTCAAACACCTGTCGGGCACTCTCTTCTCGTCGGTTCGGGGCACTCAAAATCTCACGCATGACTGCGTGATTAGGTCAATTGGTTCCACCAGAGACAACCCATCAAGAAATTTGAAAGAATTGTTGAATTCGAGGTCAATTACTGCATCATTTTCGACATCTTCTTCTGCTTCTGAAGCCCCGACTACTGGTTCATACCTATCTGTCGATATTCGAAGTCGTCAAGATGTCGCGGATATGCTTTCAGAAGCGCTTTTATGTTTTGGTGCTGTTTCAACAAGCGTGTTTGAACCCGACAGCTGTGACTCGAACGATGAGATCTCGATTGTTTCTATATTCTCTGTATCTCATGATGTGCATCAAAGTGTTGCATTGGCTGCTGATTCAATAGGCTTGAAAGAAACACCAGTTTATAAAGTCACAACAGGATATCAATCTGATTGGATCGAAAATTTTCGGGAATCTTTTCATCCTGTTGAAGTAACCAAAGGACTTTGGATTGTGCCCGAATGGATAACTCCGCCGGACATACAAGCCACAATCATAAGTCTAAACCCGGGGCTCGCTTTTGGAACCGGTGACCACCCGACAACCAAACTATGTCTAATATTATTAACCGAATTAATCAAAGGTGGTGAAACCGTTTTGGATTACGGCACGGGTTCAGGGGTTCTTGCAATTGCATCACTAAAGTTAGGTGCAGGTTTAGCCGTTGGGTTCGACATAGATCCTCAAGCCGTAACAGCTGCACGTCATAATGCTGGTTTGAACAACATCGGACCCGACAAATTGGAACTGCAAGTTGTTCCTAGTAACATTAGTCGTATGTCAACCGACGAATGGAGTCGGGTAATGAAGAGTGATGATGTAACGGAACATGATTTGGAGATTGTTAATGAGAAAGAGAAGTATGATGTGGTTGTTGCAAACATTCTTTTGAATCCGTTGCTTGATCTGGCGGATCATATTGTTTCTTATGCTAAACCGGGTGGTGTAGTCGGTCTTTCGGGTATTATCTTGGAGCAGGTACCCACAATTATGGACCGATACTCTGATCTTTTAGAAGGGATTACTGTGACAGAAATTGAAGATTGGGCTTGCATACGTGGCACAAAGAGGAAGACTCGGTAG 1158 43.52 MSVSFRSHFFKHLSGTLFSSVRGTQNLTHDCVIRSIGSTRDNPSRNLKELLNSRSITASFSTSSSASEAPTTGSYLSVDIRSRQDVADMLSEALLCFGAVSTSVFEPDSCDSNDEISIVSIFSVSHDVHQSVALAADSIGLKETPVYKVTTGYQSDWIENFRESFHPVEVTKGLWIVPEWITPPDIQATIISLNPGLAFGTGDHPTTKLCLILLTELIKGGETVLDYGTGSGVLAIASLKLGAGLAVGFDIDPQAVTAARHNAGLNNIGPDKLELQVVPSNISRMSTDEWSRVMKSDDVTEHDLEIVNEKEKYDVVVANILLNPLLDLADHIVSYAKPGGVVGLSGIILEQVPTIMDRYSDLLEGITVTEIEDWACIRGTKRKTR 385
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00486 385 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 75 382 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
Stre6g00486 385 CDD AdoMet-MTases 223 342 - -
Stre6g00486 385 Hamap Ribosomal protein L11 methyltransferase [prmA]. 71 381 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Stre6g00486 385 NCBIfam 50S ribosomal protein L11 methyltransferase 105 374 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Stre6g00486 385 Gene3D Vaccinia Virus protein VP39 163 385 IPR029063 -
Stre6g00486 385 Pfam Ribosomal protein L11 methyltransferase (PrmA) 75 381 - -
Stre6g00486 385 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 374 IPR029063 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00486 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]