Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stre6g00486 | ATGTCGGTCTCGTTTCGTAGTCATTTCTTCAAACACCTGTCGGGCACTCTCTTCTCGTCGGTTCGGGGCACTCAAAATCTCACGCATGACTGCGTGATTAGGTCAATTGGTTCCACCAGAGACAACCCATCAAGAAATTTGAAAGAATTGTTGAATTCGAGGTCAATTACTGCATCATTTTCGACATCTTCTTCTGCTTCTGAAGCCCCGACTACTGGTTCATACCTATCTGTCGATATTCGAAGTCGTCAAGATGTCGCGGATATGCTTTCAGAAGCGCTTTTATGTTTTGGTGCTGTTTCAACAAGCGTGTTTGAACCCGACAGCTGTGACTCGAACGATGAGATCTCGATTGTTTCTATATTCTCTGTATCTCATGATGTGCATCAAAGTGTTGCATTGGCTGCTGATTCAATAGGCTTGAAAGAAACACCAGTTTATAAAGTCACAACAGGATATCAATCTGATTGGATCGAAAATTTTCGGGAATCTTTTCATCCTGTTGAAGTAACCAAAGGACTTTGGATTGTGCCCGAATGGATAACTCCGCCGGACATACAAGCCACAATCATAAGTCTAAACCCGGGGCTCGCTTTTGGAACCGGTGACCACCCGACAACCAAACTATGTCTAATATTATTAACCGAATTAATCAAAGGTGGTGAAACCGTTTTGGATTACGGCACGGGTTCAGGGGTTCTTGCAATTGCATCACTAAAGTTAGGTGCAGGTTTAGCCGTTGGGTTCGACATAGATCCTCAAGCCGTAACAGCTGCACGTCATAATGCTGGTTTGAACAACATCGGACCCGACAAATTGGAACTGCAAGTTGTTCCTAGTAACATTAGTCGTATGTCAACCGACGAATGGAGTCGGGTAATGAAGAGTGATGATGTAACGGAACATGATTTGGAGATTGTTAATGAGAAAGAGAAGTATGATGTGGTTGTTGCAAACATTCTTTTGAATCCGTTGCTTGATCTGGCGGATCATATTGTTTCTTATGCTAAACCGGGTGGTGTAGTCGGTCTTTCGGGTATTATCTTGGAGCAGGTACCCACAATTATGGACCGATACTCTGATCTTTTAGAAGGGATTACTGTGACAGAAATTGAAGATTGGGCTTGCATACGTGGCACAAAGAGGAAGACTCGGTAG | 1158 | 43.52 | MSVSFRSHFFKHLSGTLFSSVRGTQNLTHDCVIRSIGSTRDNPSRNLKELLNSRSITASFSTSSSASEAPTTGSYLSVDIRSRQDVADMLSEALLCFGAVSTSVFEPDSCDSNDEISIVSIFSVSHDVHQSVALAADSIGLKETPVYKVTTGYQSDWIENFRESFHPVEVTKGLWIVPEWITPPDIQATIISLNPGLAFGTGDHPTTKLCLILLTELIKGGETVLDYGTGSGVLAIASLKLGAGLAVGFDIDPQAVTAARHNAGLNNIGPDKLELQVVPSNISRMSTDEWSRVMKSDDVTEHDLEIVNEKEKYDVVVANILLNPLLDLADHIVSYAKPGGVVGLSGIILEQVPTIMDRYSDLLEGITVTEIEDWACIRGTKRKTR | 385 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stre6g00486 | 385 | PANTHER | ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE | 75 | 382 | IPR050078 | GO:0005739(PANTHER)|GO:0008276(PANTHER) | |
| Stre6g00486 | 385 | CDD | AdoMet-MTases | 223 | 342 | - | - | |
| Stre6g00486 | 385 | Hamap | Ribosomal protein L11 methyltransferase [prmA]. | 71 | 381 | IPR004498 | GO:0006479(InterPro)|GO:0008276(InterPro) | |
| Stre6g00486 | 385 | NCBIfam | 50S ribosomal protein L11 methyltransferase | 105 | 374 | IPR004498 | GO:0006479(InterPro)|GO:0008276(InterPro) | |
| Stre6g00486 | 385 | Gene3D | Vaccinia Virus protein VP39 | 163 | 385 | IPR029063 | - | |
| Stre6g00486 | 385 | Pfam | Ribosomal protein L11 methyltransferase (PrmA) | 75 | 381 | - | - | |
| Stre6g00486 | 385 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 144 | 374 | IPR029063 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stre6g00486 | K02687 | ribosomal protein L11 methyltransferase [EC:2.1.1.-] |