Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stre6g00495	ATGAAGAAACAAAAAGTCAAAGTCAAAGGTGGTAAAGTCAAAGACAAGACAAACGAGTCAAAGGTTGAAAACGATAAGAAGAAACGAAAATACAAATTGAAATCGAAAAGAGTTAGCTTCTCGAGTCATGTAGAGGTGTTCCCGACATCAGACACTGAGCAAGAACAAGAATCATCAAAAGGAGACGGTTTGATACGCGGTAAAAGATTCACACCAGAAGAAGACGAAATATTAAAACAAGCGGTTTTAGATTACGTAAGCATAAAATGTTTGGGAGAAGAAGGTATAAAGATGGTTTTAAACTGTCGGGCTCATAAACAAGTGAGAGGATGTTGGAAAGAAATCGGGGTTTGTTTACCGCACCGCCCGTTTACAGCTGTATATTATCGGGCCCACATTTTGTTTGAACGGGCCGAAACCCGATCATGGACACAAGAAGAGATTGAAATGTTGAGAGAACTTTATAACGAACACGGTAACGATTGGAAGAAAATCGGCGAAGAACTCGGTAAACATAGGCTTCATGTTAAGGACACGTGGCGAAGAATTATTAAATTAGATAATTTGAATACTGGAAAATGGAGTCAACAAGAGTATCAAGATCTATATGATCTTGTGAATTTGGATATACAATTAAAAGTTACGGGTGAAGCGGAAAGAATATCAAAGCATGGGATGTTGAGAGATAATATCCCGTGGACCGCGATTAGTGACAAATTAACAACCAGAAGTGTCGCAACATGCTGTACGAAGTGGTATGATCAGCTGACGTCATCACTGGTTGCAGAAAAGTTGTGGTCTGATGCTGATGATTATAGAATGATTGGATCGTTATATGAGATTGATGCTGCTTGTGTTGAAGATGTTGATTGGGATAGTGTTCTTGAACATAGATCTGGTGAGATTTGTTTAAAAAGATGGAATCAAATGGTGAGATGTTTAGGGGATTATAAGAGTAAATCTTTTGGTGAACAAGTTGATATATTGGCGACACGTTATTGTCCGGATTTAGCGGAGATTAGAGAGGAATGGGATAACAGACCTCTTCTTCCATGA	1056	38.64	MKKQKVKVKGGKVKDKTNESKVENDKKKRKYKLKSKRVSFSSHVEVFPTSDTEQEQESSKGDGLIRGKRFTPEEDEILKQAVLDYVSIKCLGEEGIKMVLNCRAHKQVRGCWKEIGVCLPHRPFTAVYYRAHILFERAETRSWTQEEIEMLRELYNEHGNDWKKIGEELGKHRLHVKDTWRRIIKLDNLNTGKWSQQEYQDLYDLVNLDIQLKVTGEAERISKHGMLRDNIPWTAISDKLTTRSVATCCTKWYDQLTSSLVAEKLWSDADDYRMIGSLYEIDAACVEDVDWDSVLEHRSGEICLKRWNQMVRCLGDYKSKSFGEQVDILATRYCPDLAEIREEWDNRPLLP	351

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stre6g00495	351	CDD	SANT	142	171	IPR001005	-
	Stre6g00495	351	SUPERFAMILY	Homeodomain-like	139	188	IPR009057	-
	Stre6g00495	351	ProSiteProfiles	Myb-like domain profile.	186	256	IPR001005	-
	Stre6g00495	351	Pfam	Myb-like DNA-binding domain	143	202	-	-
	Stre6g00495	351	MobiDBLite	consensus disorder prediction	1	66	-	-
	Stre6g00495	351	Gene3D	-	184	261	-	-
	Stre6g00495	351	Gene3D	-	144	183	-	-
	Stre6g00495	351	SUPERFAMILY	Homeodomain-like	236	314	IPR009057	-
	Stre6g00495	351	MobiDBLite	consensus disorder prediction	11	26	-	-
	Stre6g00495	351	SMART	sant	190	258	IPR001005	-
	Stre6g00495	351	SMART	sant	66	137	IPR001005	-
	Stre6g00495	351	SMART	sant	139	186	IPR001005	-
	Stre6g00495	351	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	141	188	IPR017930	-
	Stre6g00495	351	PANTHER	GB\|AAC33480.1	12	349	-	-
	Stre6g00495	351	ProSiteProfiles	Myb-like domain profile.	266	311	IPR001005	-
	Stre6g00495	351	ProSiteProfiles	Myb-like domain profile.	135	184	IPR001005	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stre6g00495	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Stre	Stre-Chr11:108430355	Stre6g00495	Stre-Chr6:13643055	dispersed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Stre	Myb_DNA-bind_6	7.2e-13	CL0123		TF	MYB-related