AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stre6g00507 ATGGCAGATCGATTGTTAGCGCATGAGGTCTCCGATCTGTGCCTCGGTAAACCGCCACTCCGCTCCCTCCCTATCTCCGCCACCATCCACCACGCACTAACCGCACTCAAATCTTCCGACGACACCCACGTCAGCATTTGGACCTGCGACCACCACCACCACCCCACCTCCGACCACTTTTCCGATGACTGCCGTTGCGTCGGAAAAATCTGCATGGTTGATATCATCTGCTATCTCTGCAAAGCAGACAACATCTCATCGCCTTCAACGGCACTCAAGTCGCCGATTTCGGTTATACTTTCACATGATGTTGCCGGCGTCGTAAAACATGTCGAACCGTCGTACAGTTTGCTTGATGCCATTGATCTTATCATCAATGGCGTACATAATCTCGTGGTGCCGATTAAGAATATAACTACAATCTCGAAAAGAAAACAACTCCGGCAAGTACCATCAATCGCTCCGACGACCCACGCCGGCGGCCGGGAATTCTGTTGGCTGACACAAGAAGATGTGATCAGGTTCCTTCTGAGTTCAATCGGTTTATTCTCCCCAACCGCCGCGTATTCAATCGAGTCGCTCGGAATCGTCACGACGGAATTTCTCACAGTCAACTACCACTCGCCGGCGTCAAAAGCGGTGGACGCCATTTCAACCTCTCTCGCCGACCAAACTTCGGTTGCCGTCGTTGACGACGACGGGGTTTTGATCGGAGAAATCTCTCCGTTTACTCTCACCTACTGCGATGAGATGGTTGCCGCTGCGATCACGACCTTATCTGCTGGTGATCTAATGGCGTATATCGACTGCGGTGGTCCACCGGAAGATATAATCAGGATTGTGAAAGCGAGATTGAATGAGAGAAATCTCAACGAAATGCTTGACGAATTTTCAATTAAATCATCTAGCACGCCGTACGGTAATACCAGTTCTTCCTCTGATGAAGAAACTGTGCTGTCTCCGACGACCACCAGGTCCGGGAGGTACAGTCGGTCCGACAGCTTCTCCGCCCGGAAAATGAGGAGGGCGGAGGCTGTCGTCTGCTATGCCGGAAGCTCGTTGGTGGCGGTGATGATTCAGGCGGTTGCACTTCGTGTGAGTTATGTGTGGGTGATTGAAGAGGATTGTACTGTCGTCGGAATTGTGAAGTTTTCCGGCATGCTTGAAGTTTTCCGGGAACATTTGGAGAGGATGATTAATTAG 1203 51.04 MADRLLAHEVSDLCLGKPPLRSLPISATIHHALTALKSSDDTHVSIWTCDHHHHPTSDHFSDDCRCVGKICMVDIICYLCKADNISSPSTALKSPISVILSHDVAGVVKHVEPSYSLLDAIDLIINGVHNLVVPIKNITTISKRKQLRQVPSIAPTTHAGGREFCWLTQEDVIRFLLSSIGLFSPTAAYSIESLGIVTTEFLTVNYHSPASKAVDAISTSLADQTSVAVVDDDGVLIGEISPFTLTYCDEMVAAAITTLSAGDLMAYIDCGGPPEDIIRIVKARLNERNLNEMLDEFSIKSSSTPYGNTSSSSDEETVLSPTTTRSGRYSRSDSFSARKMRRAEAVVCYAGSSLVAVMIQAVALRVSYVWVIEEDCTVVGIVKFSGMLEVFREHLERMIN 400
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stre6g00507 400 MobiDBLite consensus disorder prediction 301 331 - -
Stre6g00507 400 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 17 394 IPR050511 GO:0005634(PANTHER)|GO:0005737(PANTHER)
Stre6g00507 400 SUPERFAMILY CBS-domain pair 5 133 IPR046342 -
Stre6g00507 400 SUPERFAMILY CBS-domain pair 187 396 IPR046342 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stre6g00507 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
159946 Stre2g06096 Stre6g00507
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Stre Stre-Chr2:178033554 Stre6g00507 Stre-Chr6:14043474 dispersed
Stre Stre-Chr2:178038982 Stre6g00507 Stre-Chr6:14043474 dispersed
Stre Stre-Chr11:73532667 Stre6g00507 Stre-Chr6:14043474 transposed
Stre Stre-Chr6:98664588 Stre6g00507 Stre-Chr6:14043474 transposed
Stre Stre-Chr2:178033075 Stre6g00507 Stre-Chr6:14043474 wgd